Handle Elastix RuntimeError in compute registration elastix task #74
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Closes #73
@rhornb Just FYI for you of a change I'll apply to the registration task. It can optionally (depending on the
skip_failed_roissetting) skip ROIs that triggered an Elastix Runtime error (see #73 for the examples when I've seen this happening). It will then return an identity transform for that ROI and create a table that lists ROIs with issues (so that these ROIs can be discarded from analysis in the end).Once this passes Github CI, I'll merge & make a release to test this on a large dataset