Repositories list

• fq_base_shifter

  Public
  Moves sequences from 1 end of a fastq file to some end of the same or another fastq file

  Python

  •0•1•1•0•Updated Dec 16, 2024Dec 16, 2024

• Tecan-Barcodes

  Public
  Barcode (index) sequences for Tecan NGS kits.

  1•2•0•0•Updated Sep 30, 2024Sep 30, 2024

• NuQuant

  Public
  NuQuant library quantification with Qubit for accurately measuring molar concentrations of NGS libraries …

  GNU Lesser General Public License v3.0

  •2•0•0•0•Updated Sep 5, 2023Sep 5, 2023

• NuQuant_Revelo

  Public
  GNU Lesser General Public License v3.0

  •0•0•0•0•Updated Sep 5, 2023Sep 5, 2023

• TecanGenomicsFastaBedCrossValidation

  Public
  A Python (3.7 or newer) script for validating and cross-validating FASTA and BED files

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jun 13, 2023Jun 13, 2023

• rrbs_umi_dedup

  Public
  Align RRBS reads and deduplicate from UMIs

  Python

  •0•0•0•0•Updated Jun 8, 2023Jun 8, 2023

• bzComplexityAnalyzer

  Public
  A package using bzip to estimate the information density of a sequence with a given alphabet (such as sequencing reads)

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Aug 25, 2022Aug 25, 2022

• NuMetRRBS

  Public
  Python

  •8•0•0•1•Updated Feb 19, 2020Feb 19, 2020

• NuMetWG

  Public template
  2•0•0•0•Updated Dec 17, 2019Dec 17, 2019

• nudup

  Public archive
  NuDup -- Marks/removes duplicate molecules based on the molecular tagging technology used in Tecan products.

  Python

  •

  GNU Lesser General Public License v3.0

  •9•14•5•1•Updated Nov 19, 2019Nov 19, 2019