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    12 repositories

    • fg-sra

      Public
      High-performance SRA-to-SAM/BAM converter replacing NCBI sam-dump
      rustbioinformaticsngs
      rustbioinformaticsngssambamsra
      Rust
      •
      MIT License
      •0•2•1•2•Updated Apr 16, 2026Apr 16, 2026

    • holodeck

      Public
      NGS read simulator
      Rust
      •
      MIT License
      •0•1•0•0•Updated Apr 15, 2026Apr 15, 2026

    • divref-wf

      Public
      Snakemake workflow implementation of DivRef resource generation
      Python
      •0•0•0•12•Updated Apr 14, 2026Apr 14, 2026

    • rust-yara

      Public
      Safe Rust FFI bindings for the YARA read mapper and indexer (SeqAn2)
      rustbioinformaticsgenomics
      rustbioinformaticsgenomicsffiyararead-mappingseqan2
      Rust
      •
      MIT License
      •0•0•0•3•Updated Apr 14, 2026Apr 14, 2026

    • refget-rs

      Public
      GA4GH refget Sequences v2.0.0 and Sequence Collections v1.0.0 — server, client, and CLI tools in Rust
      rustbioinformaticsgenomics
      rustbioinformaticsgenomicsga4ghrefgetsequence-collections
      Rust
      •
      MIT License
      •0•1•0•2•Updated Apr 14, 2026Apr 14, 2026

    • primer3-rs

      Public
      Safe, idiomatic Rust bindings to the primer3 C library for PCR primer design and oligonucleotide thermodynamic calculations
      Rust
      •
      Other
      •0•2•0•2•Updated Apr 13, 2026Apr 13, 2026

    • redskull

      Public
      A conda recipe generator for Rust crates.
      Rust
      •
      MIT License
      •0•0•0•2•Updated Apr 9, 2026Apr 9, 2026

    • fgmetric

      Public
      Pydantic-backed validation of delimited text files.
      Python
      •
      MIT License
      •0•2•6•2•Updated Apr 9, 2026Apr 9, 2026

    • nf-fgsv

      Public
      Small workflow to run fgsv and test new nextflow features.
      Nextflow
      •
      MIT License
      •0•0•0•0•Updated Apr 9, 2026Apr 9, 2026

    • snakesee

      Public
      A terminal UI for monitoring Snakemake workflows
      pythonworkflowbioinformatics
      pythonworkflowbioinformaticssnakemaketerminalmonitortui
      Python
      •
      MIT License
      •1•19•2•5•Updated Apr 9, 2026Apr 9, 2026

    • cargo-ghdoc

      Public
      View Rustdocs for PRs
      Rust
      •
      MIT License
      •1•0•0•0•Updated Apr 8, 2026Apr 8, 2026

    • .github

      Public
      fg-labs organization profile
      MIT License
      •0•0•0•0•Updated Apr 8, 2026Apr 8, 2026
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