Repositories list

• latent-spaces-book-colabs

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 24, 2026Apr 24, 2026

• bmtool

  Public
  A collection of scripts to assist with developing networks in BMTK (https://github.com/AllenInstitute/bmtk)

  pythondata-scienceneuroscience+ 3

  pythondata-scienceneurosciencematplotlibneuronbmtk

  Python

  •

  MIT License

  •77 forks•55 stars•00 issues•00 pull requests•Updated Apr 21, 2026Apr 21, 2026

• Chapter_Colabs

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 16, 2026Apr 16, 2026

• single-cell-tone-shock

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 14, 2026Apr 14, 2026

• Modeling-Environment-Setup

  Public
  A repo with instructions on how to setup a environment with *most* of the packages needed for modeling

  PowerShell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 27, 2026Mar 27, 2026

• Allen-Database-Notebooks

  Public
  A collection of notebooks that take data from different Allen Databases

  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 5, 2026Mar 5, 2026

• Neural-Networks-Machine-Learning

  Public
  collect of notebooks in the area of neural networks and machine learning

  Jupyter Notebook

  •11 fork•11 star•00 issues•00 pull requests•Updated Feb 27, 2026Feb 27, 2026

• ML_camp

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 10, 2026Feb 10, 2026

• Basics-of-Neurons-and-Networks

  Public
  A Collection of Jupyter notebooks in the area of Computational Neuroscience used in the Mizzou 4590 and 4001

  Jupyter Notebook

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jan 29, 2026Jan 29, 2026

• CI-BioEng-Class

  Public
  This repository contains notebooks for the CS / ECE 4001 / 7001 / 8001 "Integrated cyberinfrastructure – Biomedical engineering" class.

  Jupyter Notebook

  •22 forks•22 stars•00 issues•00 pull requests•Updated Jan 28, 2026Jan 28, 2026

• Fear-Lesson-Plans

  Public
  A collection of notebooks discussing how we learn to fear things

  Jupyter Notebook

  •22 forks•00 stars•00 issues•11 pull request•Updated Aug 28, 2025Aug 28, 2025

• neuron-mechanisms-library

  Public
  A library of current channels for use in Neuron-based models

  computational-neuroscienceneuronneuron-simulator

  computational-neuroscienceneuronneuron-simulator

  NMODL

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 6, 2025Aug 6, 2025

• cyneuro-resources

  Public
  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 30, 2025Jun 30, 2025

• OpenBCI

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 28, 2025May 28, 2025

• single-cell-tuning

  Public
  Jupyter Notebook

  •22 forks•00 stars•00 issues•00 pull requests•Updated May 27, 2025May 27, 2025

• cyneuroresources

  Public
  This repository exists to manually correct potential link formatting errors by forwarding to the right destination.

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 9, 2025Apr 9, 2025

• neuro_communication

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 9, 2025Feb 9, 2025

• NMM-mod-files

  Public
  Mod files for the neural-modeling-manual that colab can compile with main NMM staying private

  NMODL

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 5, 2025Feb 5, 2025

• Borgers-Examples-in-BMTK

  Public
  BMTK examples based on the Borgers book.

  Jupyter Notebook

  •55 forks•00 stars•00 issues•00 pull requests•Updated Feb 3, 2025Feb 3, 2025

• .github

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 23, 2025Jan 23, 2025

• neuroapi

  Public
  Run NEURON simulations from a webpage using this API.

  pythonapineuron

  pythonapineuron

  C

  •00 forks•00 stars•00 issues•11 pull request•Updated May 1, 2023May 1, 2023

• 8001

  Public
  A repo for the 2023 spring 8001 class to store notebooks and code.

  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 19, 2023Jan 19, 2023

• Amygdala

  Public
  Modeling Basal Forebrain of the Amygdala

  AMPL

  •44 forks•00 stars•00 issues•00 pull requests•Updated Jan 13, 2023Jan 13, 2023

• FearCircuitModules

  Public
  Fear Circuit Models for Medical Curriculum

  AMPL

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 3, 2022Dec 3, 2022

• theta

  Public
  A demo hippocampal network displaying the theta rhythm.

  C

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Sep 29, 2020Sep 29, 2020

• cyneuro.github.io

  Public
  HTML

  •00 forks•00 stars•00 issues•33 pull requests•Updated May 29, 2020May 29, 2020

• UResearch

  Public
  Assignments for Undergrad Researchers

  AMPL

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 4, 2020Mar 4, 2020