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    7 repositories

    • Core-Docs

      Public
      UCGD Docusaurus Documentation Website
      Perl
      •1•0•0•0•Updated May 5, 2025May 5, 2025

    • bgzfast

      Public
      BGZFast is a toolkit for paralelized manipulation of BGZF files
      C
      •0•0•0•0•Updated Feb 27, 2024Feb 27, 2024

    • STRling-nf

      Public
      UCGD Nextflow implementation of STRling data flow
      Nextflow
      •
      MIT License
      •3•0•0•0•Updated Oct 17, 2023Oct 17, 2023

    • GAL

      Public
      Genome Annotation Library - A perl toolkit for working with SO compliant genome annotations
      Perl
      •
      Other
      •16•0•0•0•Updated Dec 14, 2022Dec 14, 2022

    • samblaster

      Public
      samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.
      C++
      •
      MIT License
      •33•0•0•0•Updated Aug 11, 2021Aug 11, 2021

    • open-data-registry

      Public
      A registry of publicly available datasets on AWS
      Python
      •
      Apache License 2.0
      •1.1k•0•0•0•Updated Jul 6, 2020Jul 6, 2020

    • PFB2019-Walkthrough

      Public
      This is a walkthrough of the PFB2018 course taught at CSHL.
      Python
      •2•2•0•0•Updated May 20, 2019May 20, 2019
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