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    23 repositories

    • whale-birth-data-and-analysis-suite

      Public
      This Code is for tracking and aligning whales based on provided segmentation masks and computing features such as orientation, bounding boxes, and more
      Jupyter Notebook
      •0•0•0•0•Updated Dec 23, 2025Dec 23, 2025

    • whale-tag-embedded

      Public
      Source code for the software that is used to build the image for the embedded computer inside the Whale Tags to be deployed onto sperm whales for project CETI
      C
      •
      Apache License 2.0
      •8•20•6•3•Updated Dec 18, 2025Dec 18, 2025

    • libCetiRecovery

      Public
      Library defining the communication protocol between the CETI v2.x whale tags and the CETI recovery boards
      C
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2025Dec 12, 2025

    • wham

      Public
      Codebase for "WhAM: Towards A Translative Model of Sperm Whale Vocalization" (NeurIPS 2025)
      Python
      •
      MIT License
      •3•20•1•0•Updated Dec 2, 2025Dec 2, 2025

    • Complete_automated_PAM_pipelne

      Public
      A program written in Matlab for full passive acoustic monitoring (PAM) of sperm whale signals
      MATLAB
      •0•0•0•0•Updated Nov 16, 2025Nov 16, 2025

    • Sperm_whale_localization

      Public
      A program written in Matlab for localizing sperm whales by their echolocation clicks using a two element vertical array
      MATLAB
      •0•0•0•0•Updated Nov 15, 2025Nov 15, 2025

    • Coda-detector

      Public
      A program written in Matlab for detecting the sperm whales communication signals ("codas") and seperating between vocalizers in short time buffers
      MATLAB
      •3•9•0•0•Updated Nov 11, 2025Nov 11, 2025

    • whale-tag-v3-firmware

      Public
      CETI Whale Tag V3 Firmware
      C
      •0•0•0•0•Updated Nov 4, 2025Nov 4, 2025

    • Glider_Backseat_Driver

      Public
      Data from glider backseat driver experiment conducted in France
      0•0•0•0•Updated Oct 16, 2025Oct 16, 2025

    • Sperm_whale_click_presence_detector

      Public
      A program written in Matlab for detecting the presence of sperm whales echolocation clicks in short time buffers
      MATLAB
      •0•0•0•0•Updated Oct 16, 2025Oct 16, 2025

    • Predicting-Mesoscale-Movements-of-Sperm-Whale-Units-in-the-Caribbean-Through-Social-Dynamics

      Public
      Supplementary data to the paper - Predicting Mesoscale Movements of Sperm Whale Units in the Caribbean Through Social Dynamics. Here you can find the excel files of the IPI estimations and the unit presence presented in the paper
      0•0•0•0•Updated Oct 6, 2025Oct 6, 2025

    • whale-tag-recovery

      Public
      APRS and Swarm satellite based GPS tracking for tags
      C
      •4•7•7•0•Updated Oct 2, 2025Oct 2, 2025

    • Click-separator

      Public
      A program written in Matlab for detecting and source separation of sperm whales echolocation clicks
      MATLAB
      •0•1•0•0•Updated Aug 17, 2025Aug 17, 2025

    • segmentations_infrastructure

      Public
      Python
      •
      Other
      •0•1•0•0•Updated May 19, 2025May 19, 2025

    • ceti-stream

      Public
      user service for interacting with ceti whale tags v2.3 over network
      Rust
      •0•0•2•0•Updated Apr 2, 2025Apr 2, 2025

    • avatars-code

      Public
      Autonmy and Sensing code for AVATARS framework - Science Robotics 2024
      C
      •0•1•0•0•Updated Nov 1, 2024Nov 1, 2024

    • avatars-data

      Public
      Data for autonomy and sensing project 'Reinforcement Learning-Based Framework for Whale Rendezvous via Autonomous Sensing Robots'
      Apache License 2.0
      •0•0•0•0•Updated Jul 1, 2024Jul 1, 2024

    • sw-combinatoriality

      Public
      Dataset and Codebase for paper on "Contextual and Combinatorial Structure in Sperm Whale Vocalisations"
      Jupyter Notebook
      •8•5•0•0•Updated Mar 14, 2024Mar 14, 2024

    • theory-of-umt

      Public
      Experiments accompanying A Theory of Unsupervised Translation Motivated by Understanding Animal Communication (NeurIPS 2023)
      Python
      •
      MIT License
      •4•13•0•0•Updated Oct 20, 2023Oct 20, 2023

    • data-ingest

      Public
      Source code for the data pipeline that start by ingesting data from the embedded data collection devices (whale tags, moorings, etc), uploads it to the cloud and combines in a dataset consumable by the machine learning pipelines.
      Python
      •
      MIT License
      •8•24•9•7•Updated Sep 7, 2023Sep 7, 2023

    • click-detector

      Public
      MATLAB
      •1•1•0•0•Updated Mar 13, 2023Mar 13, 2023

    • tag-vizier

      Public
      Pipeline between retrieving tag data provided via APRS and SWARM and uploading said data to the cloud and other databases for visualizations and more.
      Jupyter Notebook
      •0•1•0•0•Updated Jun 21, 2022Jun 21, 2022

    • buildKernelAndModules

      Public
      Build the Linux Kernel and Modules on board the NVIDIA Jetson Nano Developer Kit
      Shell
      •
      MIT License
      •50•0•0•0•Updated Apr 9, 2021Apr 9, 2021