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    15 repositories

    • F-Cell

      Public
      F(Cell) - Function of the Cell
      Python
      •
      GNU General Public License v3.0
      •4•3•6•0•Updated Feb 24, 2026Feb 24, 2026

    • file-tag-parser

      Public
      A tag parser and data loader for filenames generated from custom adaptive optics ophthalmoscopes.
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 23, 2026Feb 23, 2026

    • iORG_StimAlign_and_Rename

      Public
      Repository for to align the onset of stimulus across datasets where the triggering of the stimulus is not synchronized with the acquisition software.
      Python
      •0•0•0•0•Updated Nov 11, 2025Nov 11, 2025

    • animal_processing

      Public
      Repository for all the needed animal processing scripts
      Python
      •0•0•0•0•Updated Oct 23, 2025Oct 23, 2025

    • AOAutomontaging

      Public
      Automontaging for AO images
      C
      •
      Other
      •7•0•0•0•Updated May 21, 2025May 21, 2025

    • HDF5_Extraction

      Public
      MATLAB
      •0•0•0•0•Updated May 15, 2025May 15, 2025

    • Metricks

      Public
      A repository containing validated coordinate structure measurements. All of these metrics are designed for adaptive optics ophthalmoscope images.
      MATLAB
      •
      GNU General Public License v3.0
      •4•1•0•0•Updated Apr 14, 2025Apr 14, 2025

    • Full-Auto-Density-Mapping

      Public
      A repository that implements a fully automated approach for estimating density, and spacing both in single images and in montages.
      MATLAB
      •
      Apache License 2.0
      •1•1•0•0•Updated Dec 4, 2024Dec 4, 2024

    • AIQ

      Public
      The reference implementation of the image quality metric in Brennan, B.D. "Quantifying Image Quality for AOSLO Images"
      Python
      •0•1•0•0•Updated Apr 3, 2024Apr 3, 2024

    • Fixation_GUI

      Public
      A Fixation Target GUI that uses a secondary monitor as the fixation screen.
      Python
      •
      Apache License 2.0
      •3•0•0•0•Updated Oct 31, 2023Oct 31, 2023

    • IOLM_Parser

      Public
      A repository that facilitates the parsing and extraction of information from IOLMaster PDFs.
      Python
      •
      GNU General Public License v3.0
      •0•3•2•0•Updated Oct 31, 2023Oct 31, 2023

    • AOSACA

      Public
      ALPAO Deformable Mirror Control Software with Grasshopper3 camera
      C++
      •1•0•0•0•Updated Aug 12, 2023Aug 12, 2023

    • AO-LOFT

      Public
      AO Laboratory Outstanding File Translator
      Apache License 2.0
      •0•0•0•0•Updated Jun 8, 2023Jun 8, 2023

    • Eye-Motion-Repair

      Public
      Code that removes residual distortions due to eye motion from images and videos processed via strip or grid registration.
      MATLAB
      •
      GNU General Public License v3.0
      •6•0•0•1•Updated Jun 7, 2022Jun 7, 2022

    • OCVL-MToolbox

      Public
      A MATLAB toolbox containing a variety of useful MATLAB functions.
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Aug 16, 2021Aug 16, 2021