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    • scdnalong

      Public
      Pipeline for processing of single-cell long read DNA data. For example data obtained through 10X-style barcoding of DNA and then sequenced on ONT/PacBio machines.
      Nextflow
      0210Updated Jan 13, 2026Jan 13, 2026
    • lrsomatic

      Public
      Workflow for somatic variant calling of long read data
      Nextflow
      320100Updated Jan 13, 2026Jan 13, 2026
    • Test datasets used for pipelines
      0000Updated Dec 22, 2025Dec 22, 2025
    • The repository with the code used is SPLONGGET paper
      Jupyter Notebook
      1100Updated Oct 7, 2025Oct 7, 2025