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    80 repositories

    • modelops

      Public
      Python
      •0•0•6•0•Updated Dec 20, 2025Dec 20, 2025

    • modelops-calabaria

      Public
      Python
      •0•0•4•0•Updated Dec 20, 2025Dec 20, 2025

    • idmtools

      Public
      Python
      •
      Other
      •5•5•51•5•Updated Dec 16, 2025Dec 16, 2025

    • DHS-Indicators-R

      Public
      R code to produce Demographic and Health Survey Indicators
      R
      •91•1•1•0•Updated Dec 16, 2025Dec 16, 2025

    • RasterToolkit

      Public
      Python scripts for working with shapefiles and rasterized population data
      Python
      •
      MIT License
      •1•1•12•1•Updated Dec 12, 2025Dec 12, 2025

    • MOSAIC-pkg

      Public
      The R package for the Metapopulation Outbreak Simulation with Agent-based Implementation for Cholera (MOSAIC).
      R
      •0•0•4•1•Updated Dec 11, 2025Dec 11, 2025

    • emodpy-snt

      Public
      SNT Workflow for EMODPY
      R
      •
      MIT License
      •7•1•6•4•Updated Dec 3, 2025Dec 3, 2025

    • dash-gene-drive

      Public
      Python
      •2•0•0•1•Updated Dec 2, 2025Dec 2, 2025

    • modelops-bundle

      Public
      Python
      •0•0•4•0•Updated Nov 25, 2025Nov 25, 2025

    • modelops-contracts

      Public
      Python
      •0•0•0•0•Updated Nov 21, 2025Nov 21, 2025

    • SAEDashboard

      Public
      JavaScript
      •
      MIT License
      •2•2•0•8•Updated Nov 12, 2025Nov 12, 2025

    • pathways-segmentation-public

      Public
      R
      •1•5•3•0•Updated Oct 31, 2025Oct 31, 2025

    • GWSpatialGenetics

      Public
      The Institute of Disease Modeling interdisciplinary collaboration with Elizabeth Thiele (Vassar) and James Cotton (Wellcome Sanger Institute) to maximize the value of epidemiological and genetics data to understand Guinea worm transmission in Chad.
      HTML
      •5•3•0•0•Updated Oct 9, 2025Oct 9, 2025

    • laser-cholera

      Public
      "LASIK" - LASER based SImulation of Kolera
      Python
      •
      MIT License
      •1•2•4•0•Updated Oct 2, 2025Oct 2, 2025

    • laser-measles

      Public
      Measles model implementations based on LASER toolkit.
      Python
      •
      MIT License
      •1•2•25•0•Updated Aug 11, 2025Aug 11, 2025

    • ai-cholera-data-mining

      Public
      AI enhanced data mining for cholera surveillance data.
      HTML
      •1•2•0•0•Updated Aug 7, 2025Aug 7, 2025

    • laser_measles_project_template

      Public template
      Template repository for building with laser-measles
      Shell
      •
      MIT License
      •1•0•0•0•Updated Aug 2, 2025Aug 2, 2025

    • data_access_library

      Public
      Data access library Demo Code and Contribution Guide
      HTML
      •
      MIT License
      •1•1•1•0•Updated Jul 26, 2025Jul 26, 2025

    • malaria-model_validation

      Public
      Python
      •3•3•17•0•Updated Jul 24, 2025Jul 24, 2025

    • laser-polio-nigeria

      Public
      Companion package for laser-polio with calibration scripts and data for Nigeria and environs
      Python
      •
      MIT License
      •0•1•0•0•Updated Jul 16, 2025Jul 16, 2025

    • clusteringForVarietyIdentification

      Public
      Python
      •
      MIT License
      •1•0•0•0•Updated Jul 10, 2025Jul 10, 2025

    • covasim

      Public
      COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions
      simulationmodelabmstochasticepidemiologyagent-basednpicoronaviruscovid-19covid
      Python
      •
      MIT License
      •232•279•18•6•Updated Jul 1, 2025Jul 1, 2025

    • SmallAreaEstimationForSurveyIndicators

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated Jun 20, 2025Jun 20, 2025

    • MOSAIC-docs

      Public
      Documentation for the Metapopulation Outbreak Simulation with Agent-based Implementation for Cholera (MOSAIC).
      R
      •0•0•0•0•Updated May 21, 2025May 21, 2025

    • emodpy-typhoid

      Public
      Python API for EMOD-Typhoid model
      Python
      •
      Creative Commons Zero v1.0 Universal
      •4•1•8•0•Updated Apr 16, 2025Apr 16, 2025

    • MOSAIC-data

      Public
      A repository containing raw and processed data for the Metapopulation Outbreak Simulation with Agent-based Implementation for Cholera (MOSAIC).
      0•0•0•0•Updated Apr 16, 2025Apr 16, 2025

    • Bridging-the-Gap-Low-Resource-African-Languages

      Public
      Code and data corresponding to paper Bridging the Gap: Enhancing LLM Performance for Low-Resource African Languages with New Benchmarks, Fine-Tuning, and Cultural Adjustments
      Jupyter Notebook
      •
      Other
      •1•11•0•2•Updated Mar 6, 2025Mar 6, 2025

    • IDM-CMS

      Public
      IDM compartmental modeling software (CMS)
      cmssimulationidmmsestochastic
      C#
      •
      Other
      •10•9•9•3•Updated Feb 19, 2025Feb 19, 2025

    • PACE-HRH-UI

      Public
      PACE-HRH-UI is a health capacity estimation tool built using R and Shinyapps
      R
      •
      MIT License
      •5•3•2•0•Updated Jan 13, 2025Jan 13, 2025

    • PACE-HRH

      Public archive
      PACE-HRH (Population-Aware Capacity Estimator for Human Resources for Health)
      R
      •
      MIT License
      •6•3•21•2•Updated Dec 17, 2024Dec 17, 2024