Repositories list

• ASE_analysis

  Public
  ASE Analysis

  Python

  •0•0•0•0•Updated Nov 17, 2025Nov 17, 2025

• scSNViz

  Public
  HTML

  •

  Other

  •0•0•1•0•Updated Oct 13, 2025Oct 13, 2025

• NGS

  Public
  Next-Gen Sequencing tools from the Horvath Lab

  bioinformaticsrna-seqsingle-cell

  Python

  •

  MIT License

  •17•44•3•0•Updated Sep 12, 2025Sep 12, 2025

• scesnv-catalog

  Public
  Single-cell expressed SNV catalog

  JavaScript

  •0•0•0•0•Updated Aug 14, 2024Aug 14, 2024

• ReQTL

  Public
  ReQTL: Identifying correlations between expressed SNVs and gene expression using RNA-sequencing data

  R

  •4•10•0•0•Updated Aug 27, 2020Aug 27, 2020

• RsQTL

  Public
  R

  •1•0•0•0•Updated Jan 22, 2020Jan 22, 2020

• RNA2DNAlign

  Public
  RNA2DNAlign evaluates evidence for asymmetric allele distribution in next-gen sequencing reads of DNA and RNA samples from the same individual

  Python

  •

  MIT License

  •0•1•0•0•Updated Aug 30, 2017Aug 30, 2017

• MATLAB_Rewrite

  Public
  Python

  •0•0•0•0•Updated May 8, 2017May 8, 2017

• SNPlice

  Public
  SNPlice finds and evaluates the co-occurrence of single-nucleotide-polymorphisms (SNP) and altered splicing in next-gen mRNA sequence reads.

  Python

  •

  MIT License

  •0•2•0•0•Updated Jan 19, 2017Jan 19, 2017