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@Bioinformaticsnl Bionformatics Netherlands

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    23 repositories

    • ldapauthenticator

      Public
      LDAP Authenticator Plugin for Jupyter
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •176•0•0•0•Updated Jun 15, 2017Jun 15, 2017

    • jbrowse

      Public
      A modern genome browser built with JavaScript and HTML5.
      JavaScript
      •
      Other
      •199•0•0•0•Updated Apr 9, 2015Apr 9, 2015

    • allbiotc2

      Public
      Benchmark pipeline for Structural Variation analyses, funded by the ALLBio
      Python
      •11•0•0•0•Updated Apr 22, 2014Apr 22, 2014

    • enter

      Public
      Add a bug report to ask to join the group
      1•0•0•0•Updated Apr 15, 2014Apr 15, 2014

    • viz.js

      Public
      A hack to put GraphViz on the web.
      C
      •
      Other
      •366•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • docker

      Public
      Docker - the open-source application container engine
      Go
      •
      Apache License 2.0
      •19k•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • learn.jquery.com

      Public
      jQuery Learning Center web site content
      JavaScript
      •
      Other
      •474•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • scythe

      Public
      A 3'-end adapter contaminant trimmer
      TeX
      •
      MIT License
      •38•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • d3

      Public
      A JavaScript visualization library for HTML and SVG.
      JavaScript
      •
      Other
      •23k•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • sga

      Public
      de novo sequence assembler using string graphs
      C++
      •80•0•0•0•Updated Apr 11, 2014Apr 11, 2014

    • Jellyfish

      Public
      A fast multi-threaded k-mer counter
      C++
      •
      GNU General Public License v3.0
      •139•0•0•0•Updated Apr 11, 2014Apr 11, 2014

    • samtools

      Public
      This is the official development repository for samtools.
      C
      •
      MIT License
      •609•0•0•0•Updated Apr 10, 2014Apr 10, 2014

    • snpr

      Public
      The sources of the openSNP website
      Ruby
      •56•0•0•0•Updated Apr 9, 2014Apr 9, 2014

    • Apollo

      Public
      Genome annotation editor, with a Java servlet backend and a Javascript client that runs in a web browser as a JBrowse plugin
      Java
      •
      Other
      •87•0•0•0•Updated Apr 8, 2014Apr 8, 2014

    • impress.js

      Public
      It's a presentation framework based on the power of CSS3 transforms and transitions in modern browsers and inspired by the idea behind prezi.com.
      JavaScript
      •6.6k•0•0•0•Updated Apr 5, 2014Apr 5, 2014

    • Snap.svg

      Public
      The JavaScript library for modern SVG graphics.
      JavaScript
      •
      Apache License 2.0
      •1.1k•0•0•0•Updated Mar 25, 2014Mar 25, 2014

    • bcbb

      Public
      Incubator for useful bioinformatics code, primarily in Python and R
      Python
      •243•0•0•0•Updated Mar 12, 2014Mar 12, 2014

    • A50-plot

      Public
      R
      •2•0•0•0•Updated Feb 6, 2014Feb 6, 2014

    • webmummer

      Public
      Web Browser Mummer Plot Viewer
      JavaScript
      •
      GNU General Public License v2.0
      •2•0•0•0•Updated Dec 15, 2013Dec 15, 2013

    • sql.js

      Public
      SQLite compiled to JavaScript through Emscripten
      C
      •1.1k•0•0•0•Updated Aug 9, 2013Aug 9, 2013

    • cufflinksviewer

      Public
      cuff links viewer
      Python
      •
      MIT License
      •1•0•0•0•Updated Jul 29, 2013Jul 29, 2013

    • qrqc

      Public
      Quick Read Quality Control
      R
      •6•0•0•0•Updated Apr 11, 2013Apr 11, 2013

    • SimSeq

      Public
      An illumina paired-end and mate-pair short read simulator. This project attempts to model as many of the quirks that exist in Illumina data as possible. Some of…
      C
      •
      Other
      •12•0•0•0•Updated Jun 15, 2012Jun 15, 2012
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