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Add specific bronchopulmonary segment terms for HCA lung dataset #3623

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270 changes: 270 additions & 0 deletions src/ontology/uberon-edit.obo
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Expand Up @@ -225635,6 +225635,276 @@ is_a: UBERON:0006914 ! squamous epithelium
relationship: has_part CL:4030023 ! respiratory tract hillock cell
relationship: part_of UBERON:0007196 ! tracheobronchial tree

[Term]
id: UBERON:9900001
name: right apical bronchopulmonary segment
def: "A bronchopulmonary segment that is the most superior segment of the upper lobe of the right lung and is supplied by the apical segmental bronchus." [PMID:18271171]
synonym: "right apical segment" EXACT []
synonym: "S1 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002170 ! upper lobe of right lung
relationship: part_of UBERON:0002170 ! upper lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900002
name: right posterior bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the posterior portion of the upper lobe of the right lung and is supplied by the posterior segmental bronchus." [PMID:18271171]
synonym: "right posterior segment" EXACT []
synonym: "S2 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002170 ! upper lobe of right lung
relationship: part_of UBERON:0002170 ! upper lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900003
name: right anterior bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the anterior portion of the upper lobe of the right lung and is supplied by the anterior segmental bronchus." [PMID:18271171]
synonym: "right anterior segment" EXACT []
synonym: "S3 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002170 ! upper lobe of right lung
relationship: part_of UBERON:0002170 ! upper lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900004
name: right lateral bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the lateral portion of the middle lobe of the right lung and is supplied by the lateral segmental bronchus." [PMID:18271171]
synonym: "right lateral segment" EXACT []
synonym: "S4 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002174 ! middle lobe of right lung
relationship: part_of UBERON:0002174 ! middle lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900005
name: right medial bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the medial portion of the middle lobe of the right lung and is supplied by the medial segmental bronchus." [PMID:18271171]
synonym: "right medial segment" EXACT []
synonym: "S5 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002174 ! middle lobe of right lung
relationship: part_of UBERON:0002174 ! middle lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900006
name: right superior bronchopulmonary segment
def: "A bronchopulmonary segment that is the most superior segment of the lower lobe of the right lung and is supplied by the superior segmental bronchus." [PMID:18271171]
synonym: "right superior segment" EXACT []
synonym: "S6 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002171 ! lower lobe of right lung
relationship: part_of UBERON:0002171 ! lower lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900007
name: right medial basal bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the medial basal portion of the lower lobe of the right lung and is supplied by the medial basal segmental bronchus." [PMID:18271171]
synonym: "right medial basal segment" EXACT []
synonym: "S7 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002171 ! lower lobe of right lung
relationship: part_of UBERON:0002171 ! lower lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900008
name: right anterior basal bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the anterior basal portion of the lower lobe of the right lung and is supplied by the anterior basal segmental bronchus." [PMID:18271171]
synonym: "right anterior basal segment" EXACT []
synonym: "S8 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002171 ! lower lobe of right lung
relationship: part_of UBERON:0002171 ! lower lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900009
name: right lateral basal bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the lateral basal portion of the lower lobe of the right lung and is supplied by the lateral basal segmental bronchus." [PMID:18271171]
synonym: "right lateral basal segment" EXACT []
synonym: "S9 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002171 ! lower lobe of right lung
relationship: part_of UBERON:0002171 ! lower lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900010
name: right posterior basal bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the posterior basal portion of the lower lobe of the right lung and is supplied by the posterior basal segmental bronchus." [PMID:18271171]
synonym: "right posterior basal segment" EXACT []
synonym: "S10 right lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0002171 ! lower lobe of right lung
relationship: part_of UBERON:0002171 ! lower lobe of right lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900011
name: left apical-posterior bronchopulmonary segment
def: "A bronchopulmonary segment that combines the apical and posterior regions of the upper lobe of the left lung and is supplied by the apical-posterior segmental bronchus." [PMID:18271171]
synonym: "left apico-posterior segment" EXACT []
synonym: "S1+2 left lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0008952 ! upper lobe of left lung
relationship: part_of UBERON:0008952 ! upper lobe of left lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900012
name: left anterior bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the anterior portion of the upper lobe of the left lung and is supplied by the anterior segmental bronchus." [PMID:18271171]
synonym: "left anterior segment" EXACT []
synonym: "S3 left lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0008952 ! upper lobe of left lung
relationship: part_of UBERON:0008952 ! upper lobe of left lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900013
name: left superior lingular bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the superior portion of the lingula, part of the upper lobe of the left lung, and is supplied by the superior lingular segmental bronchus." [PMID:18271171]
synonym: "left superior lingular segment" EXACT []
synonym: "S4 left lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0008952 ! upper lobe of left lung
relationship: part_of UBERON:0008952 ! upper lobe of left lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900014
name: left inferior lingular bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the inferior portion of the lingula, part of the upper lobe of the left lung, and is supplied by the inferior lingular segmental bronchus." [PMID:18271171]
synonym: "left inferior lingular segment" EXACT []
synonym: "S5 left lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0008952 ! upper lobe of left lung
relationship: part_of UBERON:0008952 ! upper lobe of left lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900015
name: left superior bronchopulmonary segment
def: "A bronchopulmonary segment that is the most superior segment of the lower lobe of the left lung and is supplied by the superior segmental bronchus." [PMID:18271171]
synonym: "left superior segment" EXACT []
synonym: "S6 left lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0008953 ! lower lobe of left lung
relationship: part_of UBERON:0008953 ! lower lobe of left lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900016
name: left antero-medial basal bronchopulmonary segment
def: "A bronchopulmonary segment that combines the anterior and medial basal regions of the lower lobe of the left lung and is supplied by the antero-medial basal segmental bronchus." [PMID:18271171]
synonym: "left anteromedial basal segment" EXACT []
synonym: "S7+8 left lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0008953 ! lower lobe of left lung
relationship: part_of UBERON:0008953 ! lower lobe of left lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900017
name: left lateral basal bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the lateral basal portion of the lower lobe of the left lung and is supplied by the lateral basal segmental bronchus." [PMID:18271171]
synonym: "left lateral basal segment" EXACT []
synonym: "S9 left lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0008953 ! lower lobe of left lung
relationship: part_of UBERON:0008953 ! lower lobe of left lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Term]
id: UBERON:9900018
name: left posterior basal bronchopulmonary segment
def: "A bronchopulmonary segment that is located in the posterior basal portion of the lower lobe of the left lung and is supplied by the posterior basal segmental bronchus." [PMID:18271171]
synonym: "left posterior basal segment" EXACT []
synonym: "S10 left lung" EXACT []
is_a: UBERON:8600017 ! bronchopulmonary segment
intersection_of: UBERON:8600017 ! bronchopulmonary segment
intersection_of: part_of UBERON:0008953 ! lower lobe of left lung
relationship: part_of UBERON:0008953 ! lower lobe of left lung
relationship: dc-contributor https://orcid.org/0000-0002-9185-3994 ! Gloria S Pryhuber
property_value: dcterms-date "2025-11-03T17:48:43Z" xsd:dateTime
property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3444" xsd:anyURI
created_by: dragon-ai-agent

[Typedef]
id: aboral_to
name: aboral to
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