Bug fix: count_ana_dispersal_event always returned 0 range contractions#16
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rurik-uniba wants to merge 2 commits intonmatzke:masterfrom
Open
Bug fix: count_ana_dispersal_event always returned 0 range contractions#16rurik-uniba wants to merge 2 commits intonmatzke:masterfrom
rurik-uniba wants to merge 2 commits intonmatzke:masterfrom
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…ns in Biogeographic stochastic mapping (originally reported by Ollie White in 2020)
Bug fix: count_ana_clado_events does not include e_total_list in ana_totals_list
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count_ana_dispersal_event always returned zero range contractions in Biogeographic stochastic mapping (BSM).
This was originally reported by Ollie White in 2020.
############ test if there is at least 1 extinction event (range contraction) reconstructed in any of the 50 stochastic mapping
BSMs_w_sourceAreas <- readRDS('BSMs_w_sourceAreas.RDS') # output from simulate_source_areas_ana_clado on example data (but it is true for any dataset)
any(count_ana_clado_events(BSMs_w_sourceAreas$clado_events_tables, BSMs_w_sourceAreas$ana_events_tables, c("K","O","M","H"), c("K","O","M","H"))$e_totals_list != 0)
BSMs_w_sourceAreas.zip