Sequence Degradation Project

Code for investigating sequence degradation effect on DCA couplings

Name		Name	Last commit message	Last commit date
Latest commit History 252 Commits
.github		.github
aln		aln
analysis		analysis
assets		assets
data		data
dca		dca
done		done
mf_plm_reweight		mf_plm_reweight
msa		msa
structures		structures
styles		styles
.gitignore		.gitignore
README.md		README.md
analysis.slurm		analysis.slurm
analysis_replicates.slurm		analysis_replicates.slurm
check_reference.py		check_reference.py
diagram.svg		diagram.svg
inference.slurm		inference.slurm
job.slurm		job.slurm
job_run_analysis.slurm		job_run_analysis.slurm
move2done.sh		move2done.sh
plot_neffL_vs_maxppv.py		plot_neffL_vs_maxppv.py
plot_zscore_vs_distance.py		plot_zscore_vs_distance.py
plot_zscore_vs_neffL.py		plot_zscore_vs_neffL.py
remove.py		remove.py
run_analysis.py		run_analysis.py
run_inference.py		run_inference.py
run_pipeline.py		run_pipeline.py
run_replicate_analysis.py		run_replicate_analysis.py
run_replicates_inference.py		run_replicates_inference.py
system_names.txt		system_names.txt

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