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The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a container to make them easily available for pipelines

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neurodesk/neurocontainers

Neurocontainers repository is used for automatic building and testing of containers available in Neurodesktop

A Tutorial on how to add new applications to NeuroDesk is here: How to Add new tools

Information on the Neurodesk project is available at neurodesk.org

Information on Neurocontainers is available at neurodesk.org/docs/neurocontainers

Contributing

For developers working on this repository, comprehensive instructions for GitHub Copilot and other development tools are available in .github/copilot-instructions.md. This file includes:

  • Repository structure and architecture
  • Development environment setup
  • Build and testing workflows
  • Code style and conventions
  • Best practices and common tasks

These instructions help ensure consistency and provide guidance for both human developers and AI-powered coding assistants.

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The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a container to make them easily available for pipelines

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