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Upgrade owlapi_wrapper JAR to 1.5.1#267

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jvendetti merged 1 commit intodevelopfrom
chore/upgrade-owlapi-wrapper
Mar 24, 2026
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Upgrade owlapi_wrapper JAR to 1.5.1#267
jvendetti merged 1 commit intodevelopfrom
chore/upgrade-owlapi-wrapper

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This PR upgrades the owlapi_wrapper JAR from 1.5.0 to 1.5.1. The new version fixes an issue where some ontology classes don't receive either a notation or prefixIRI annotation during processing. See owlapi_wrapper PR #33 for details.

When a class has neither annotation, notation_to_class_uri can't resolve it and returns nil. As a result, REST requests for those classes may fail with a 400 response, for example:

https://data.bioontology.org/ontologies/EMRO/classes/0000000

with the error:

"The input class id '0000000' is not a valid IRI".

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codecov bot commented Mar 24, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 80.11%. Comparing base (3f042f0) to head (47d508b).
⚠️ Report is 2 commits behind head on develop.

Additional details and impacted files
@@             Coverage Diff             @@
##           develop     #267      +/-   ##
===========================================
- Coverage    80.13%   80.11%   -0.02%     
===========================================
  Files           84       84              
  Lines         5880     5880              
===========================================
- Hits          4712     4711       -1     
- Misses        1168     1169       +1     
Flag Coverage Δ
unittests 80.11% <100.00%> (-0.02%) ⬇️

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@jvendetti jvendetti self-assigned this Mar 24, 2026
@jvendetti jvendetti merged commit 89e981c into develop Mar 24, 2026
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