Urban Mental Health report

src/natcap/invest/carbon/reporter.py

@@ -208,10 +208,6 @@ def report(file_registry: dict, args_dict: dict, model_spec: ModelSpec,
 
     agg_results_table = _generate_agg_results_table(args_dict, file_registry)
 
-    lulc_pre_caption = gettext(
-        'Values in the legend are listed in order of frequency (most common '
-        'first).')
-
     with open(target_html_filepath, 'w', encoding='utf-8') as target_file:
         target_file.write(TEMPLATE.render(
             report_script=model_spec.reporter,
@@ -226,7 +222,7 @@ def report(file_registry: dict, args_dict: dict, model_spec: ModelSpec,
             agg_results_table=agg_results_table,
             inputs_img_src=inputs_img_src,
             inputs_caption=input_raster_caption,
-            lulc_pre_caption=lulc_pre_caption,
+            lulc_pre_caption=report_constants.LULC_PRE_CAPTION,
             outputs_img_src=outputs_img_src,
             outputs_caption=output_raster_caption,
             intermediate_raster_sections=intermediate_raster_sections,

src/natcap/invest/reports/raster_utils.py

@@ -170,6 +170,10 @@ def __post_init__(self):
         self.colormap = plt.get_cmap(self.colormap if self.colormap
                                      else COLORMAPS[self.datatype])
 
+    def plot_on_axis(self, fig, ax, arr, cmap, imshow_kwargs, colorbar_kwargs):
+        mappable = ax.imshow(arr, cmap=cmap, **imshow_kwargs)
+        fig.colorbar(mappable, ax=ax, **colorbar_kwargs)
+
 
 def build_raster_plot_configs(id_lookup_table, raster_plot_tuples):
     """Build RasterPlotConfigs for use in plotting input or output rasters.
@@ -462,8 +466,9 @@ def plot_raster_list(raster_list: list[RasterPlotConfig]):
                 len(patches), n_plots, xy_ratio))
             leg.set_in_layout(True)
         else:
-            mappable = ax.imshow(arr, cmap=cmap, **imshow_kwargs)
-            fig.colorbar(mappable, ax=ax, **colorbar_kwargs)
+            config.plot_on_axis(
+                fig, ax, arr, cmap, imshow_kwargs, colorbar_kwargs)
+
     [ax.set_axis_off() for ax in axs.flatten()]
     return fig
 

src/natcap/invest/reports/report_constants.py

@@ -18,4 +18,9 @@
     'in GIS to assess its accuracy.'
 )
 
+LULC_PRE_CAPTION = gettext(
+    'LULC values in the legend are listed in order of frequency (most common '
+    'first).'
+)
+
 TABLE_PAGINATION_THRESHOLD = 10

src/natcap/invest/reports/templates/models/urban_mental_health.html

@@ -0,0 +1,149 @@
+{% extends 'base.html' %}
+
+{% block styles %}
+  {{ super() }}
+  {% include 'datatable-styles.html' %}
+{% endblock styles %}
+
+{% block content %}
+
+  {{ super() }}
+
+  {% from 'args-table.html' import args_table %}
+  {% from 'caption.html' import caption %}
+  {% from 'content-grid.html' import content_grid %}
+  {% from 'metadata.html' import list_metadata %}
+  {% from 'raster-plot-img.html' import raster_plot_img %}
+  {% from 'wide-table.html' import wide_table %}
+
+
+
+  <h2 class="section-header">Results</h2>
+
+  {{ accordion_section(
+    'Aggregate Results',
+    agg_results_table | safe
+  )}}
+
+  {{ accordion_section(
+    'Primary Outputs',
+    content_grid([
+      (caption(raster_group_caption, pre_caption=True), 100),
+      (raster_plot_img(outputs_img_src, 'Primary Outputs'), 100),
+      (caption(outputs_caption, definition_list=True), 100)
+    ])
+  )}}
+
+   {{ accordion_section(
+    'Preventable Cases by AOI Vector',
+    content_grid(
+      [
+        (content_grid([
+          ('<div style="display:flex; justify-content:center;"><div id="cases_map"></div></div>', 100),
+          (caption(cases_map_caption, aggregate_map_source_list), 100)
+        ]), 50),
+
+        (content_grid([
+          ('<div style="display:flex; justify-content:center;"><div id="cost_map"></div></div>', 100),
+          (caption(cost_map_caption, aggregate_map_source_list), 100)
+        ]), 50)
+      ] if cost_map_json else [
+        (content_grid([
+          ('<div style="display:flex; justify-content:center;"><div id="cases_map"></div></div>', 100),
+          (caption(cases_map_caption, aggregate_map_source_list), 100)
+        ]), 100)
+      ]
+    )
+  ) }}
+
+  {% for section in intermediate_raster_sections %}
+  {{ accordion_section(
+    section['heading'],
+    content_grid([
+      (caption(raster_group_caption, pre_caption=True), 100),
+      (raster_plot_img(section['img_src'], section['heading']), 100),
+      (caption(section['caption'], definition_list=True), 100)
+    ])
+  )}}
+  {% endfor %}
+
+  {{ accordion_section(
+    'Output Raster Stats',
+    content_grid([
+      (stats_table_note, 100),
+      (wide_table(
+        output_raster_stats_table | safe,
+        font_size_px=16
+      ), 100)
+    ])
+  )}}
+
+  <h2 class="section-header">Inputs</h2>
+
+  {% if args_dict != None %}
+    {{ accordion_section(
+      'Arguments',
+      args_table(args_dict)
+    )}}
+  {% endif %}
+
+  {% set input_items = [
+    (caption(raster_group_caption, pre_caption=True), 100)
+  ] %}
+
+  {% if args_dict['lulc_base'] %}
+    {% set input_items = input_items + [
+      (caption(lulc_pre_caption, pre_caption=True), 100)
+    ] %}
+  {% endif %}
+
+  {% set input_items = input_items + [
+    (raster_plot_img(inputs_img_src, 'Raster Inputs'), 100),
+    (caption(inputs_caption, definition_list=True), 100)
+  ] %}
+
+  {{ accordion_section(
+    'Input Maps',
+    content_grid(input_items)
+  )}}
+
+  {{ accordion_section(
+    'Input Raster Stats',
+    content_grid([
+      (stats_table_note, 100),
+      (wide_table(
+        input_raster_stats_table | safe,
+        font_size_px=16
+      ), 100)
+    ])
+  )}}
+
+  <h2 class="section-header">Metadata</h2>
+
+  {{
+    accordion_section(
+      'Output Filenames and Descriptions',
+      list_metadata(model_spec_outputs),
+      expanded=False
+    )
+  }}
+
+{% endblock content %}
+
+
+
+{% from 'vegalite-plot.html' import embed_vega %}
+
+{% block scripts %}
+  {{ super() }}
+  <script src="https://cdn.jsdelivr.net/npm/vega@5"></script>
+  <script src="https://cdn.jsdelivr.net/npm/vega-lite@5.20.1"></script>
+  <script src="https://cdn.jsdelivr.net/npm/vega-embed@6"></script>
+  {% include 'vega-embed-js.html' %}
+
+  {% set chart_spec_id_list = [(cases_map_json, 'cases_map')] %}
+  {% if cost_map_json %}
+    {% set chart_spec_id_list = chart_spec_id_list + [(cost_map_json, 'cost_map')] %}
+  {% endif %}
+  {{ embed_vega(chart_spec_id_list) }}
+{% endblock scripts %}