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TuomasBorman
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Jan 12, 2026
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| taxs <- do.call( | ||
| getPrevalence, | ||
| c(list(assay(x, assay.type), sort = TRUE, include.lowest = TRUE), | ||
| dots)) |
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As dots are just ... without any modification, shouldn't the old code do the exact same?
Comment on lines
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| if (!is.null(rank)) { | ||
| .check_taxonomic_rank(rank, x) | ||
| x <- agglomerateByRank(x, rank = rank) | ||
| } |
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You could use .merge_features and keep the functionality "optional" so that the rank argument is not visible in function definition (too many arguments make the usage more complex)
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Any updates on this @0xMuluh ? |
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ping #768