This is an adapted version of zUMIs.
We added the following changes:
- fixed a small bug for the edge case where there are no internal reads
- adapted the STAR-2pass mode such that we keep the SJ.out.tab files from the first STAR pass
forked from sdparekh/zUMIs
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zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
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mhecke/zUMIs_edit
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zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
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