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EvoDiffusion

This repo contains an implementation of DDIM with the intention of applying it to genetic sequence data.

You can install this package locally by running

poetry build
pip install <.whl>

Alternatively, if you would like to develop this package, please install poetry

poetry install
poetry shell

You can then run the examples within the poetry shell or run the notebooks with jupyter notebook. Dependencies can be added with poetry add <package_name>. If you would like this only as a development dependency, please add the --dev flag.

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Generative viral sequence models

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