Ld decay #15
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Ld decay #15
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Skip comparison if out of range, do not advance edges unless a statistic is to be computed. Also add two-way stats
This change fixes the bin boundaries. Now, all bin boundaries for sites will be left closed right open. The boundaries for branches will be closed on both sides, minimizing the number of spanning bins. This is to avoid integrating over a region of 0 length, which would affect the bincount over a region that integrates to 0. Since we're performing an integration, it doesn't matter if the left/right boundaries are opened or closed. Finally, add support for specifying a recombination map. I've performed some minimal testing, but I'm not quite sure if it's working correctly. I have a suspicion that there's a bug somewhere. It will allow the user to specify bin boundaries in cM. Requires the tree to be simulated with the same recombination map.
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LD Decay branch.