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I can't create the annotation

Status: Open.

#27 In lcalviell/ORFquant;

· 1127yangyuping opened on Apr 29, 2025

Error in shift(resize(GRanges(unspl), width = 1, fix = "start"), shift = ct) : unused argument (shift = ct)

Status: Open.

#26 In lcalviell/ORFquant;

· Kratos12138 opened on Feb 21, 2025

Error in { : task 2 failed - "missing value where TRUE/FALSE needed"

Status: Open.

#25 In lcalviell/ORFquant;

· dev1113 opened on Mar 25, 2024

How can I get path_to_rl_cutoff_file or P_sites track

Status: Open.

#23 In lcalviell/ORFquant;

· LongYuan0529 opened on Sep 19, 2023

Error in library(GTF_annotation$genome_package, character.only = T)

Status: Open.

#22 In lcalviell/ORFquant;

· HarshithaBC opened on Jul 3, 2023

Error when running prepare_annotation_files() from vignette

Status: Open.

#20 In lcalviell/ORFquant;

· Joseph-Waldron opened on Jul 7, 2022

Error in library(GTF_annotation$genome_package, character.only = T)

Status: Open.

#19 In lcalviell/ORFquant;

· hsn-ylmz opened on Jul 6, 2022

Error while running some files

Status: Open.

#18 In lcalviell/ORFquant;

· amit-mhamane opened on Apr 16, 2022

Cannot find single_sequences.2bit ,reason 'No such file or directory'

Status: Open.

#17 In lcalviell/ORFquant;

· jiang98028 opened on Apr 6, 2022

task 17 failed - "'end' must be <= 'length(x)'" in run_ORFquant step

Status: Open.

#15 In lcalviell/ORFquant;

· tsekara opened on Dec 2, 2021

Clearly active uORFs not being predicted as active

Status: Open.

#14 In lcalviell/ORFquant;

· Roleren opened on Nov 8, 2021

Errors in Gene Positions of Candidate ORFs

Status: Open.

#13 In lcalviell/ORFquant;

· gmtong opened on Oct 11, 2021