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TypeError: PosDirCalculatorPE() missing 5 required positional arguments: 'cont2pos', 'matepos', 's2len', 'cont2_len', and 'read_len'

Status: Open.

#85 In ksahlin/BESST;

· JuniusH opened on Sep 3, 2023

TypeError due to integer division change in python3

Status: Open.

#78 In ksahlin/BESST;

· nwespe opened on Jul 9, 2020

Too many reads filtered out?

Status: Open.

#77 In ksahlin/BESST;

· melop opened on Jul 5, 2020

TypeError when running BESST

Status: Open.

#61 In ksahlin/BESST;

· ademcan opened on Aug 15, 2017

Doc incorrect

Status: Open.

#58 In ksahlin/BESST;

· rnjv opened on May 4, 2017

AGP/GFF output show no overlap

Status: Open.

#55 In ksahlin/BESST;

· sletort opened on Mar 7, 2017

MathOverflow warning

enhancement

Status: Open.

#53 In ksahlin/BESST;

· melop opened on Feb 22, 2017

Output scaffold graph with assembled scaffolds

Status: Open.

#51 In ksahlin/BESST;

· dbrowneup opened on Jan 9, 2017

Metagenomics

question

Status: Open.

#45 In ksahlin/BESST;

· davidvilanova opened on Oct 24, 2016

RE: reads_to_ctg_map.py

bug

Status: Open.

#34 In ksahlin/BESST;

· Malabady opened on Jun 13, 2016

Coverage based filtering of repeats fails to converge for some instances

bug

Status: Open.

#28 In ksahlin/BESST;

· ksahlin opened on Mar 21, 2016