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The params that the KBPArallel gets are failing with a missing cog.aux file

                 'job_input': {'app_id': 'DomainAnnotation',
                               'method': 'DomainAnnotation.search_domains',
                               'narrative_cell_info': {},
                               'params': [{'dms_ref': 'KBasePublicGeneDomains/All-1.0.8',

When you make a cell for DomainAnnotation you can see

        "dms_ref": "KBasePublicGeneDomains/All-1.0.10",

@bio-boris bio-boris changed the title Update kb_phylogenomicsImpl.py DEVOPS-2382 Fix missing cog.aux May 7, 2025
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These look good to me. My testing of the beta version of the module seems to confirm that the fix is working.

@bio-boris bio-boris merged commit a899744 into main May 13, 2025
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@bio-boris bio-boris deleted the missing-cog-aux branch May 13, 2025 17:32
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3 participants