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1. ProteinClusterTools ProteinClusterTools Public

   Pipeline for exploring protein families using homology based or vector representation based methods to generate clusters in sequence space.

   Python 18 3

2. DMS-FastQ-processing DMS-FastQ-processing Public

   A set of scripts for analyzing deep sequencing data for deep mutational scanning (DMS)

   Python 3 3

3. MetaSSN MetaSSN Public

   A Python script suite for generating metanodes and annotation of sequence similarity networks.

   Python 5 2

4. AmpliPy AmpliPy Public

   Python implementation of the Amplify 4 PCR program.

   Python

5. DMS-EC50 DMS-EC50 Public

   A set of scripts to calculate EC50 values of a mutant library from deep sequencing data following a selection experiment.

   Python 1

6. danderson8/Epistasis danderson8/Epistasis Public

   Calculate and visualize epistasis from combinatorial library

   Python 3 3