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Tutorials for the course "Bioinformatic analysis of transposable elements" in 2025 by Physalia

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Name		Name	Last commit message	Last commit date
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Lectures		Lectures
Practicals		Practicals
README.md		README.md

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Physalia 2025 - Transposable element tutorials

Tutorials for the course "Bioinformatic analysis of transposable elements" in 2025 by Physalia.

TE annotation and discovery

Practical 1 - part 1: use of RepeatModeler2
Practical 1 - part 2: use of RepeatMasker
Practical 2 - part 1: TE diversity with TEAid
Practical 2 - part 2: manual curation of TE alignments

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Tutorials for the course "Bioinformatic analysis of transposable elements" in 2025 by Physalia

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Perl 85.2%
R 9.9%
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