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Data EPICplus.address not found

Status: Open.

#25 In hovestadtlab/conumee2;

· GianlucaMattei opened on Nov 12, 2025

CNV.genomeplot with output="png" is only outputting one genomeplot

Status: Open.

#23 In hovestadtlab/conumee2;

· yamachan18 opened on Jun 23, 2025

CNA output Y-axis

Status: Open.

#22 In hovestadtlab/conumee2;

· Mars-code-sudo opened on Jun 9, 2025

saveRDS fails on R-4.4.x / BioC 3.20 due to missing containsOutOfMemoryData method

Status: Open.

#20 In hovestadtlab/conumee2;

· ttriche opened on Apr 13, 2025

"deep" states (deep deletion, high-level amplification) don't seem to be supported in GISTIC output

Status: Open.

#19 In hovestadtlab/conumee2;

· ttriche opened on Mar 26, 2025

GISTIC output doesn't include chrX or chrY even when segmentation and annotation do

Status: Open.

#17 In hovestadtlab/conumee2;

· ttriche opened on Mar 21, 2025

unable to pass arguments to create_anno

Status: Open.

#14 In hovestadtlab/conumee2;

· Blosberg opened on Mar 19, 2025

Error in .local(object, ...) : Please run CNV.focal

Status: Open.

#10 In hovestadtlab/conumee2;

· gabyrech opened on Feb 18, 2025

Reference Genome chm13v2

Status: Open.

#9 In hovestadtlab/conumee2;

· MerelJongmans opened on Feb 5, 2025