Rename AMReXParticleData to AMReXParticle

[henry2004y]

This change renames the AMReXParticleData class to AMReXParticle in src/flekspy/amrex/particle_data.py and updates all references across the codebase, including tests, documentation, and samples. This rename aims for conciseness and better alignment with other class names in the library.

Breaking Changes:

• AMReXParticleData is now AMReXParticle. Users should update their code to use the new class name.

[gemini-code-assist]

Summary of Changes

Hello @henry2004y, I'm Gemini Code Assist¹! I'm currently reviewing this pull request and will post my feedback shortly. In the meantime, here's a summary to help you and other reviewers quickly get up to speed!

This pull request focuses on a significant refactoring effort to rename the AMReXParticleData class to AMReXParticle. This change is driven by the goal of enhancing naming consistency and conciseness within the flekspy library. The update is comprehensive, touching all relevant files from core class definitions to imports, documentation, and tests, ensuring that the new, more intuitive class name is uniformly adopted throughout the project.

Highlights

• Class Renaming: The AMReXParticleData class has been renamed to AMReXParticle to improve conciseness and align with existing naming conventions within the library.
• Codebase-Wide Updates: All references to the old class name have been systematically updated across the entire codebase, including documentation, sample scripts, and unit tests, ensuring consistency.
• Breaking Change: Users who directly import or instantiate AMReXParticleData will need to update their code to use the new AMReXParticle class name.

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[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 78.34%. Comparing base (9c43e99) to head (c80c63a).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files

@@           Coverage Diff           @@
##             main     #180   +/-   ##
=======================================
  Coverage   78.34%   78.34%           
=======================================
  Files          31       31           
  Lines        4341     4341           
=======================================
  Hits         3401     3401           
  Misses        940      940           

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[gemini-code-assist]

Code Review

This pull request primarily renames the AMReXParticleData class to AMReXParticle across the entire codebase. This change is reflected in imports, class definitions, docstrings, code examples in docs/amrex_data.ipynb, sample scripts like samples/vdf_matrix.py, and all relevant test files (tests/test_amrex_3d_plots.py, tests/test_amrex_loader.py, tests/test_fleks.py, tests/test_gmm_parameters.py). The flekspy/__init__.py file was also updated to correctly export and load the newly named class. There were no review comments provided for these changes.