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Can you add the function of XAS simulation with CASPT2?

Status: Open.

#36 In hart-lab/bagel;

· wangh0606 opened on Jan 31, 2025

BAGEL v0.91 crashing in instances where non-essential l2FC much smaller than essential l2FC

Status: Open.

#33 In hart-lab/bagel;

· aris-aristodemou-crh opened on Jan 9, 2025

Example Run - QC Fails Immediately

Status: Open.

#32 In hart-lab/bagel;

· tiganolab opened on Sep 6, 2024

per-guide BFs output file column order

Status: Open.

#29 In hart-lab/bagel;

· t113admin opened on Apr 11, 2022

BAGEL.py pr error

Status: Open.

#28 In hart-lab/bagel;

· niekwit opened on Feb 3, 2022

Example not working?

Status: Open.

#27 In hart-lab/bagel;

· yesitsjess opened on Nov 25, 2021

Bioconda recipe

Status: Open.

#26 In hart-lab/bagel;

· mjsteinbaugh opened on Mar 9, 2021

Tags/releases

Status: Open.

#19 In hart-lab/bagel;

· t113admin opened on Jun 27, 2020

Would it be possible to make the normalisation optional?

Status: Open.

#18 In hart-lab/bagel;

· t113admin opened on May 21, 2020

bootstrapping vs cross-validation

Status: Open.

#12 In hart-lab/bagel;

· igordot opened on Jan 15, 2020

Issues with regression failing in Bagel 2. Version 0.91 still supported?

Status: Open.

#8 In hart-lab/bagel;

· mjafin opened on Sep 23, 2019

FC_THRESH in BAGEL.py was use of len instead of sum intentional?

Status: Open.

#2 In hart-lab/bagel;

· hannahkimincompbio opened on Mar 20, 2019