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Add namespace_override for easier control over graph_id #40

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Merged
alexander-belikov merged 2 commits into from
Feb 4, 2026
Merged

Add namespace_override for easier control over graph_id #40

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64e954b
Add namespace_override
guillaumematheron Feb 4, 2026
b0ebbe7
graph uri override instead of namespace override
guillaumematheron Feb 4, 2026
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1 change: 1 addition & 0 deletions ontocast/agent/check_chunks.py
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Original file line number Diff line number Diff line change
Expand Up @@ -60,6 +60,7 @@ def check_chunks_empty(state: AgentState) -> AgentState:
state.current_chunk = state.chunks.pop(0)
state.node_visits = defaultdict(int)
state.status = Status.FAILED
# TODO use method for easier tracing
else:
state.current_chunk = Chunk(
text="",
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14 changes: 9 additions & 5 deletions ontocast/onto/state.py
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Expand Up @@ -5,11 +5,7 @@
from pydantic import ConfigDict, Field

from ontocast.onto.chunk import Chunk
from ontocast.onto.constants import (
CHUNK_NULL_IRI,
DEFAULT_DOMAIN,
ONTOLOGY_NULL_IRI,
)
from ontocast.onto.constants import CHUNK_NULL_IRI, DEFAULT_DOMAIN, ONTOLOGY_NULL_IRI
from ontocast.onto.context import AgentContext, AgentType, ContextManager
from ontocast.onto.enum import FailureStage, Status, WorkflowNode
from ontocast.onto.model import BasePydanticModel, Suggestions
Expand Down Expand Up @@ -167,6 +163,8 @@ class AgentState(BasePydanticModel):
default=None,
)

graph_uri_override: str | None = Field(default=None)

source_url: str | None = Field(
description="Source URL from JSON input file (for provenance tracking)",
default=None,
Expand Down Expand Up @@ -578,6 +576,12 @@ def doc_namespace(self):
"""
return iri2namespace(self.doc_iri, ontology=False)

@property
def graph_uri(self):
if self.graph_uri_override is not None:
return self.graph_uri_override
return self.doc_namespace

@property
def ontology_id(self):
"""Get the document namespace.
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8 changes: 3 additions & 5 deletions ontocast/toolbox.py
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Expand Up @@ -22,9 +22,7 @@
from ontocast.tool.llm import LLMTool
from ontocast.tool.ontology_manager import OntologyManager
from ontocast.tool.sparql import SPARQLTool
from ontocast.tool.triple_manager.core import (
TripleStoreManager,
)
from ontocast.tool.triple_manager.core import TripleStoreManager

logger = logging.getLogger(__name__)

Expand Down Expand Up @@ -193,7 +191,7 @@ def serialize(self, state: AgentState) -> None:
self.filesystem_manager.serialize(state.current_ontology)
self.filesystem_manager.serialize(
state.aggregated_facts,
graph_uri=state.doc_namespace,
graph_uri=state.graph_uri,
)
if (
self.triple_store_manager is not None
Expand All @@ -203,7 +201,7 @@ def serialize(self, state: AgentState) -> None:
self.triple_store_manager.serialize(state.current_ontology)
self.triple_store_manager.serialize(
state.aggregated_facts,
graph_uri=state.doc_namespace,
graph_uri=state.graph_uri,
)

async def initialize(self) -> None:
Expand Down