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ODM-12584: Update description for manageData.yaml #482

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Merged
LeonaNedeljkovic merged 3 commits into from
Oct 17, 2025
Merged

ODM-12584: Update description for manageData.yaml #482

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ODM-12584: Update description for manageData.yaml
LeonaNedeljkovic Oct 13, 2025
4428c2c
Merge branch 'develop' into feature/ODM-12584-delete-cell-metadata-group
eeliane Oct 15, 2025
9ed88dd
Merge branch 'develop' into feature/ODM-12584-delete-cell-metadata-group
LeonaNedeljkovic Oct 17, 2025
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4 changes: 3 additions & 1 deletion openapi/v1/manageData.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -100,6 +100,7 @@ paths:
* `SAMPLE_GROUP`
* `LIBRARY_GROUP`
* `PREPARATION_GROUP`
* `CELL_GROUP`
* `TABULAR_DATA`
* `GENE_VARIANT`
* `FLOW_CYTOMETRY`
Expand All @@ -108,7 +109,8 @@ paths:

Moreover, if the selected object is linked to any other data, the endpoint will also delete the linked data associated with it according to the specified rules:
* If you delete a `STUDY`, the entire study with all the listed group types and files, will be removed.
* Deleting a `SAMPLE_GROUP` will result in the removal of all samples associated with this sample group, along with any linked `TABULAR_DATA`/`GENE_VARIANT`/`FLOW_CYTOMETRY`/`LIBRARY_GROUP`/`PREPARATION_GROUP`. The linked `TABULAR_DATA`/`GENE_VARIANT`/`FLOW_CYTOMETRY` will be deleted, even if it is linked to another metadata group.
* Deleting a `SAMPLE_GROUP` will result in the removal of all samples associated with this sample group, along with any linked `TABULAR_DATA`/`GENE_VARIANT`/`FLOW_CYTOMETRY`/`LIBRARY_GROUP`/`PREPARATION_GROUP`/`CELL_GROUP`. The linked `TABULAR_DATA`/`GENE_VARIANT`/`FLOW_CYTOMETRY`/`CELL_GROUP` will be deleted, even if it is linked to another metadata group.
* Deleting a `LIBRARY_GROUP` or `PREPARATION_GROUP` will result in the removal of all libraries or preparations associated with this group, along with any linked `TABULAR_DATA`/`CELL_GROUP`.
* If you delete `TABULAR_DATA`/`GENE_VARIANT`/`FLOW_CYTOMETRY`, all associated data, such as links and runs will be removed from ODM.
* If you delete `REFERENCE_GENOME`, searching for variant by variantFeature (genes) won't be available for linked VCF groups.
* If you delete `FILE`, the file will be removed from ODM.
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