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Explicit shell/run arguments
Previously we just tacked on $@ to the end of the shell script. But often this is completely the wrong place for it, and for basically anything that is a proper shell script (e.g. editGarnConfig) rather than single command, makes it impossible to correctly pass arguments down.
This PR changes behavior so that you have to explicitly use$@/$ *. This is exactly like any bash script, so I don't think it should be too confusing.
Stacked on #437
Fixes #363.