feat: add colorblind-accessible mode for progress bars

snakesee/cli.py

@@ -63,6 +63,7 @@ def watch(
     weighting_strategy: Literal["index", "time"] = "index",
     half_life_logs: int = 10,
     half_life_days: float = 7.0,
+    colorblind: bool = False,
 ) -> None:
     """
     Watch a Snakemake workflow in real-time with a TUI dashboard.
@@ -88,6 +89,8 @@ def watch(
         half_life_days: Half-life in days for time-based weighting.
                        After this many days, a run's weight is halved. Default: 7.0.
                        Only used when weighting_strategy="time".
+        colorblind: Use colorblind-accessible mode with distinct characters in
+                    progress bars. Can also be toggled with 'a' key in TUI.
     """
     try:
         workflow_dir = _validate_workflow_dir(workflow_dir)
@@ -115,6 +118,9 @@ def watch(
     profile_path = profile or find_profile(workflow_dir)
 
     from snakesee.tui import WorkflowMonitorTUI
+    from snakesee.tui.accessibility import ACCESSIBLE_CONFIG
+
+    accessibility_config = ACCESSIBLE_CONFIG if colorblind else None
 
     tui = WorkflowMonitorTUI(
         workflow_dir=workflow_dir,
@@ -125,6 +131,7 @@ def watch(
         weighting_strategy=weighting_strategy,
         half_life_logs=half_life_logs,
         half_life_days=half_life_days,
+        accessibility_config=accessibility_config,
     )
     tui.run()
 

snakesee/tui/__init__.py

@@ -28,6 +28,9 @@
 """
 
 # Re-export public API for backward compatibility
+from snakesee.tui.accessibility import ACCESSIBLE_CONFIG
+from snakesee.tui.accessibility import DEFAULT_CONFIG
+from snakesee.tui.accessibility import AccessibilityConfig
 from snakesee.tui.monitor import DEFAULT_REFRESH_RATE
 from snakesee.tui.monitor import FG_BLUE
 from snakesee.tui.monitor import FG_GREEN
@@ -37,6 +40,9 @@
 from snakesee.tui.monitor import WorkflowMonitorTUI
 
 __all__ = [
+    "ACCESSIBLE_CONFIG",
+    "AccessibilityConfig",
+    "DEFAULT_CONFIG",
     "DEFAULT_REFRESH_RATE",
     "FG_BLUE",
     "FG_GREEN",

snakesee/tui/accessibility.py

@@ -0,0 +1,59 @@
+"""Accessibility configuration for colorblind-friendly rendering.
+
+Provides alternative visual encodings so that progress bar status
+can be distinguished without relying on color perception alone.
+"""
+
+from dataclasses import dataclass
+
+
+@dataclass(frozen=True, slots=True)
+class BarStyle:
+    """Character and label for a single progress bar segment.
+
+    Attributes:
+        char: The character used to fill the segment.
+        label: Human-readable label for the legend.
+    """
+
+    char: str
+    label: str
+
+
+@dataclass(frozen=True, slots=True)
+class AccessibilityConfig:
+    """Visual encoding configuration for progress bar rendering.
+
+    Controls which characters are used for each segment of the progress bar
+    and whether the legend is always displayed.
+
+    Attributes:
+        succeeded: Style for completed/succeeded jobs.
+        failed: Style for failed jobs.
+        remaining: Style for remaining/pending jobs.
+        incomplete: Style for incomplete jobs (workflow interrupted).
+        show_legend: If True, always show the legend (not just on failure).
+    """
+
+    succeeded: BarStyle
+    failed: BarStyle
+    remaining: BarStyle
+    incomplete: BarStyle
+    show_legend: bool
+
+
+DEFAULT_CONFIG = AccessibilityConfig(
+    succeeded=BarStyle(char="\u2588", label="succeeded"),
+    failed=BarStyle(char="\u2588", label="failed"),
+    remaining=BarStyle(char="\u2591", label="remaining"),
+    incomplete=BarStyle(char="\u2591", label="incomplete"),
+    show_legend=False,
+)
+
+ACCESSIBLE_CONFIG = AccessibilityConfig(
+    succeeded=BarStyle(char="=", label="succeeded"),
+    failed=BarStyle(char="X", label="failed"),
+    remaining=BarStyle(char="\u00b7", label="remaining"),
+    incomplete=BarStyle(char="?", label="incomplete"),
+    show_legend=True,
+)

snakesee/tui/monitor.py

@@ -53,6 +53,9 @@
 from snakesee.state.clock import get_clock
 from snakesee.state.paths import WorkflowPaths
 from snakesee.state.workflow_state import WorkflowState
+from snakesee.tui.accessibility import ACCESSIBLE_CONFIG
+from snakesee.tui.accessibility import DEFAULT_CONFIG
+from snakesee.tui.accessibility import AccessibilityConfig
 from snakesee.validation import EventAccumulator
 from snakesee.validation import ValidationLogger
 from snakesee.validation import compare_states
@@ -145,6 +148,7 @@ class WorkflowMonitorTUI:
         p: Pause/resume auto-refresh
         e: Toggle time estimation
         w: Toggle wildcard conditioning (estimate per sample/batch)
+        a: Toggle colorblind-accessible mode
         r: Force refresh
         Ctrl+r: Hard refresh (reload historical data)
 
@@ -192,6 +196,7 @@ def __init__(
         weighting_strategy: WeightingStrategy = "index",
         half_life_logs: int = 10,
         half_life_days: float = 7.0,
+        accessibility_config: AccessibilityConfig | None = None,
     ) -> None:
         """
         Initialize the TUI.
@@ -205,6 +210,8 @@ def __init__(
             weighting_strategy: Strategy for weighting historical data ("index" or "time").
             half_life_logs: Half-life in run count for index-based weighting.
             half_life_days: Half-life in days for time-based weighting.
+            accessibility_config: Visual encoding config for colorblind accessibility.
+                Defaults to DEFAULT_CONFIG (standard block characters).
         """
         self.workflow_dir = workflow_dir
         self.refresh_rate = refresh_rate
@@ -213,6 +220,7 @@ def __init__(
         self.weighting_strategy = weighting_strategy
         self.half_life_logs = half_life_logs
         self.half_life_days = half_life_days
+        self._accessibility_config = accessibility_config or DEFAULT_CONFIG
         self.console = Console()
         self._running = True
         self._estimator: TimeEstimator | None = None
@@ -1019,7 +1027,7 @@ def _handle_key(self, key: str) -> bool:
         return False
 
     def _handle_toggle_key(self, key: str) -> bool:
-        """Handle toggle keys (?, p, e, w, r, Ctrl+r). Returns True if key was handled."""
+        """Handle toggle keys (?, p, e, w, a, r, Ctrl+r). Returns True if handled."""
         if key == "?":
             self._show_help = True
             self._force_refresh = True
@@ -1042,6 +1050,14 @@ def _handle_toggle_key(self, key: str) -> bool:
         if key.lower() == "r":
             self._force_refresh = True
             return True
+        if key.lower() == "a":
+            # Toggle colorblind-accessible mode
+            if self._accessibility_config == DEFAULT_CONFIG:
+                self._accessibility_config = ACCESSIBLE_CONFIG
+            else:
+                self._accessibility_config = DEFAULT_CONFIG
+            self._force_refresh = True
+            return True
         if key == "\x12":  # Ctrl+r - hard refresh
             self._init_estimator()
             self._force_refresh = True
@@ -1559,6 +1575,7 @@ def _make_help_panel(self) -> Panel:
         help_text.add_row("p", "Pause/resume auto-refresh")
         help_text.add_row("e", "Toggle time estimation")
         help_text.add_row("w", "Toggle wildcard conditioning")
+        help_text.add_row("a", "Toggle colorblind-accessible mode")
         help_text.add_row("r", "Force refresh")
         help_text.add_row("Ctrl+r", "Hard refresh (reload historical data)")
         help_text.add_row("", "")
@@ -1648,20 +1665,28 @@ def _make_progress_bar(self, progress: WorkflowProgress, width: int = 40) -> Tex
         total = max(1, progress.total_jobs)
         succeeded = progress.completed_jobs
         failed = progress.failed_jobs
+        config = self._accessibility_config
 
         # Calculate widths for each segment
         succeeded_width = int((succeeded / total) * width)
         failed_width = int((failed / total) * width)
-        remaining_width = width - succeeded_width - failed_width
+        unfinished = max(0, progress.total_jobs - progress.completed_jobs - progress.failed_jobs)
+        incomplete = (
+            min(len(progress.incomplete_jobs_list), unfinished)
+            if progress.status == WorkflowStatus.INCOMPLETE
+            else 0
+        )
+        incomplete_width = int((incomplete / total) * width)
+        remaining_width = width - succeeded_width - failed_width - incomplete_width
 
         # Build the bar with colored segments
         bar = Text()
-        bar.append("█" * succeeded_width, style="green")
-        bar.append("█" * failed_width, style="red")
-        if progress.status == WorkflowStatus.INCOMPLETE:
-            bar.append("░" * remaining_width, style="yellow")  # Incomplete = yellow
-        else:
-            bar.append("░" * remaining_width, style="dim")
+        bar.append(config.succeeded.char * succeeded_width, style="green")
+        bar.append(config.failed.char * failed_width, style="red")
+        if incomplete_width > 0:
+            bar.append(config.incomplete.char * incomplete_width, style="yellow")
+        if remaining_width > 0:
+            bar.append(config.remaining.char * remaining_width, style="dim")
 
         return bar
 
@@ -1719,14 +1744,35 @@ def _make_progress_panel(
 
         eta_text = Text.from_markup("  ".join(eta_parts)) if eta_parts else Text("")
 
-        # Legend for the progress bar when there are failures
+        # Legend for the progress bar
+        config = self._accessibility_config
         legend = Text()
-        if progress.failed_jobs > 0:
+        show_legend = progress.failed_jobs > 0 or config.show_legend
+        if show_legend:
             legend.append("  (", style="dim")
-            legend.append("█", style="green")
-            legend.append(f"={progress.completed_jobs} succeeded  ", style="dim")
-            legend.append("█", style="red")
-            legend.append(f"={progress.failed_jobs} failed", style="dim")
+            legend.append(config.succeeded.char, style="green")
+            legend.append(f"={progress.completed_jobs} {config.succeeded.label}", style="dim")
+            if progress.failed_jobs > 0:
+                legend.append("  ", style="dim")
+                legend.append(config.failed.char, style="red")
+                legend.append(f"={progress.failed_jobs} {config.failed.label}", style="dim")
+            unfinished = max(
+                0, progress.total_jobs - progress.completed_jobs - progress.failed_jobs
+            )
+            incomplete = (
+                min(len(progress.incomplete_jobs_list), unfinished)
+                if progress.status == WorkflowStatus.INCOMPLETE
+                else 0
+            )
+            remaining = unfinished - incomplete
+            if incomplete > 0:
+                legend.append("  ", style="dim")
+                legend.append(config.incomplete.char, style="yellow")
+                legend.append(f"={incomplete} {config.incomplete.label}", style="dim")
+            if remaining > 0:
+                legend.append("  ", style="dim")
+                legend.append(config.remaining.char, style="dim")
+                legend.append(f"={remaining} {config.remaining.label}", style="dim")
             legend.append(")", style="dim")
 
         # Border color based on status (use FG colors for normal states)
@@ -1740,7 +1786,7 @@ def _make_progress_panel(
         border_style = border_colors.get(progress.status, FG_BLUE)
 
         # Combine progress line with legend if present
-        if progress.failed_jobs > 0:
+        if show_legend:
             full_progress = Text()
             full_progress.append(progress_line)
             full_progress.append(legend)

tests/test_cli.py

@@ -63,6 +63,28 @@ def test_watch_calls_tui(self, snakemake_dir: Path, tmp_path: Path) -> None:
                 weighting_strategy="index",
                 half_life_logs=10,
                 half_life_days=7.0,
+                accessibility_config=None,
+            )
+            mock_instance.run.assert_called_once()
+
+    def test_watch_calls_tui_in_accessible_mode(self, snakemake_dir: Path, tmp_path: Path) -> None:
+        """Test that watch enables accessible rendering when requested."""
+        from snakesee.tui.accessibility import ACCESSIBLE_CONFIG
+
+        with patch("snakesee.tui.WorkflowMonitorTUI") as mock_tui:
+            mock_instance = mock_tui.return_value
+            watch(tmp_path, refresh=2.0, no_estimate=True, colorblind=True)
+
+            mock_tui.assert_called_once_with(
+                workflow_dir=tmp_path,
+                refresh_rate=2.0,
+                use_estimation=False,
+                profile_path=None,
+                use_wildcard_conditioning=True,
+                weighting_strategy="index",
+                half_life_logs=10,
+                half_life_days=7.0,
+                accessibility_config=ACCESSIBLE_CONFIG,
             )
             mock_instance.run.assert_called_once()