Add JaM to run comparison pipeline #2000
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JacquesVergine
commented
Dec 22, 2025
| - "gs://mtrx-us-central1-hub-dev-storage/kedro/data/releases/v0.13.0/runs/auto-kg-release-v0-13-0-79a1a345/datasets/matrix_generation/model_output/fold_{0..4}/matrix_predictions" | ||
| - "gs://mtrx-us-central1-hub-dev-storage/kedro/data/tests/v0.13-jane-filtering/runs/pilot-run-chunyu-filter-cfa81327/datasets/matrix_generation/model_output/fold_{0..4}/matrix_predictions" | ||
| file_format: "parquet" | ||
| score_col_name: "treat score" |
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Revert to transformed treat score vs treat score
JacquesVergine
commented
Dec 22, 2025
| # file_format: "parquet" or "csv" | ||
| # score_col_name: <Name of column containing drug-disease pair scores> | ||
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| # WIP |
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Add ticket so solve memory leak with polars.LazyFrames in run_comparison pipeline
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Description of the changes
Fixes / Resolves the following issues:
Checklist:
enhancementorbug)pulling in latest main, uncomment the below "Merge Notification" section and
describe steps necessary for people
kedro run -e sample -p test_sample(see sample environment guide)