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  1. analysisSCMT analysisSCMT Public

    The jupyter notebook will import single cell morphodynamic trajectories (SCMTs), compute SCMTs for a chosen trajectory snippet length.

    Jupyter Notebook

  2. DDPM DDPM Public

    Forked from hojonathanho/diffusion

    Denoising Diffusion Probabilistic Models

    Python

  3. dynamicsland dynamicsland Public

    Forked from jcopperm/dynamicsland

    Turn a transition matrix into a transition landscape for analyzing dynamics

    Jupyter Notebook

  4. e3nn e3nn Public

    Forked from e3nn/e3nn

    A modular framework for neural networks with Euclidean symmetry

    Python

  5. Polymers Polymers Public

    Coarse-grained sticker spacer model of proteins

    C++

  6. ZuckermanLab/CellTrajAnl ZuckermanLab/CellTrajAnl Public

    Analysis of cell state transition dynamics from the brightfield microscopy images of MCF10A cells treated with ligands EGF, OSM, TGF-beta, and their combinations.

    1