MetaWorkflow Handler and MetaWorkflow Run Handler: Pipeline Automation#11

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vstevensf wants to merge 43 commits intomasterfrom

vs-mwfr-handler

Commits on Sep 28, 2022

first draft of mwfh base magma code
vstevensf
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Commits on Oct 26, 2022

Added pytests for magma/utils.py
vstevensf
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Commits on Nov 1, 2022

Further edits to pytests of magma utils
vstevensf
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Commits on Nov 3, 2022

Finished topological sort, need to add docstrings and refactor helper fxns
vstevensf
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Modified some tests, removed a few extraneous. Still need to finish tests for topological sort.
vstevensf
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Commits on Nov 4, 2022

Refactored the utils functions for topological sort into its own file.
vstevensf
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Commits on Nov 9, 2022

Added some pytests for topological sort.
vstevensf
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Commits on Nov 17, 2022

Commits on Nov 23, 2022

Small change to test file for topological sort
vstevensf
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Commits on Nov 28, 2022

Finished validation of MWF handler and its corresponding pytests.
vstevensf
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Commits on Jan 11, 2023

Put the ValidatedDictionary class in its own file
vstevensf
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Commits on Jan 13, 2023

Finished ValidatedDictionary class
vstevensf
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Commits on Jan 20, 2023

Commits on Feb 6, 2023

Further edits to basic handler classes
vstevensf
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Commits on Feb 16, 2023

Merge branch 'master' into vs-mwfr-handler
vstevensf
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Commits on Apr 21, 2023

Commits on Apr 24, 2023

More updates the mwfr handler creation

dbmi
authored and
dbmi
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Commits on May 3, 2023

Almost final draft of create MWFR handler functionality
vstevensf
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Commits on May 10, 2023

some edits to the create run handler pytests -- need to refactor
vstevensf
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Commits on May 16, 2023

Commits on Jun 1, 2023

Commits on Jun 24, 2023

Draft of checkstatus tests
vstevensf
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