A project to practice reproducible practices.
- Organize & Dependencies
- Bash for automated data acquisition
- Snakemake
- R
Original Project from Riffomas.
- https://www.youtube.com/watch?v=olu821RTQA8 (246)
- https://www.youtube.com/watch?v=Ft8ayhfgaqo (247)
- https://www.youtube.com/watch?v=r9PWnEmz_tc (248)
- https://www.youtube.com/watch?v=nNKwcIfcwgo&list=PLmNrK_nkqBpJTSHf3IsN_K_pjFu58z9Oq&index=34 (249)
- https://www.youtube.com/watch?v=LKprlFCLnSA&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=5 (250)
- https://www.youtube.com/watch?v=xuxMxhW0fHU&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=7 (251)
- https://www.youtube.com/watch?v=NSy-WByR8Qo&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=6 (252)
- https://www.youtube.com/watch?v=gy2jaP_OK_c&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=8 (253)
- https://www.youtube.com/watch?v=3rVvgfcpM-k&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=9 (254)
- https://www.youtube.com/watch?v=eNpt6hz-UGo&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=10 (255)
- https://www.youtube.com/watch?v=J6JIKk2MGs4&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=11 (257)
- https://www.youtube.com/watch?v=FnJKF3QfqwY&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=12 (258)
- https://www.youtube.com/watch?v=ozta7H7WK58&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=13 (259)
- https://www.youtube.com/watch?v=t1MGEVeTgQM&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=14 (260)
- https://www.youtube.com/watch?v=tYGBT1T2JvU&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=15 (261)
- https://www.youtube.com/watch?v=BLCzG5k35xw&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=16 (262)
- https://www.youtube.com/watch?v=ddJtPQ9FECQ&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=17 (263)
- https://www.youtube.com/watch?v=r_Q4s0XcP40&list=PLmNrK_nkqBpK6iqwN3QeQyXqI6DrcGgIm&index=20 (264)
https://www.ncei.noaa.gov/pub/data/ghcn/daily/readme.txt
- Creates an env for this project
- environment.yml
- mamba env create -f environment.yml
- conda activate drought
snakemake --dag targets | dot -Tpng > dag.png
snakemake -R