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Iterate on Documentation Tutorials

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

Task

#195 In czbiohub-sf/biahub;

· srivarra opened on Dec 11, 2025

API Documentation

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

Task

#194 In czbiohub-sf/biahub;

· srivarra opened on Dec 11, 2025

Feature request: <code>biahub concatenate</code> should transfer <code>ome.multiscales.axes</code> and <code>ome.omero</code> metadata

Status: Open.

#193 In czbiohub-sf/biahub;

· ieivanov opened on Dec 8, 2025

Extend <code>biahub concatenate</code> to support concatenation of zarr stores with pyramid levels

Status: Open.

#192 In czbiohub-sf/biahub;

· ieivanov opened on Dec 8, 2025

Add Documentation Site

Status: Open.

#190 In czbiohub-sf/biahub;

· srivarra opened on Dec 4, 2025

Designing Templates

Status: Open.

#186 In czbiohub-sf/biahub;

· srivarra opened on Nov 26, 2025

<code>biahub estimate-stitch</code> and <code>biahub stitch</code> should allow for independent tile locations per timepoint

Status: Open.

#185 In czbiohub-sf/biahub;

· ieivanov opened on Nov 26, 2025

Using phase cross-correlation with <code>biahub estimate-stitch</code> only works if FOVs are named XXXYYY

Status: Open.

#184 In czbiohub-sf/biahub;

· ieivanov opened on Nov 26, 2025

<code>biahub estimate-stitch</code> requires MM summary metadata

Status: Open.

#183 In czbiohub-sf/biahub;

· ieivanov opened on Nov 26, 2025

biahub and waveorder reconstructions should carry previous zarr metadata fields

Status: Open.

#182 In czbiohub-sf/biahub;

· ieivanov opened on Nov 26, 2025

patch_size argument in <code>biahub characterize-psf</code> is not optional as intented

Status: Open.

#181 In czbiohub-sf/biahub;

· ieivanov opened on Nov 25, 2025

Add <code>biahub convert</code>

Status: Open.

#177 In czbiohub-sf/biahub;

· srivarra opened on Oct 28, 2025