Bugfix: implicit declaration of function ‘gzfread’

[Tazovsky]

I get error while installing latest version from CRAN on CentOS.

Solution: replace gzfread with gzread

# Installing packages --------------------------------------------------------
- Installing yyjsonr ...                        FAILED
Error: Error installing package 'yyjsonr':
===================================

* installing *source* package ‘yyjsonr’ ...
** package ‘yyjsonr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -std=gnu11 -I"/opt/R/4.2.3/lib/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -c R-yyjson-parse.c -o R-yyjson-parse.o
gcc -std=gnu11 -I"/opt/R/4.2.3/lib/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -c R-yyjson-serialize.c -o R-yyjson-serialize.o
gcc -std=gnu11 -I"/opt/R/4.2.3/lib/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -c geojson-parse.c -o geojson-parse.o
gcc -std=gnu11 -I"/opt/R/4.2.3/lib/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -c geojson-serialize.c -o geojson-serialize.o
gcc -std=gnu11 -I"/opt/R/4.2.3/lib/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -c init.c -o init.o
gcc -std=gnu11 -I"/opt/R/4.2.3/lib/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -c ndjson-parse.c -o ndjson-parse.o
ndjson-parse.c: In function ‘count_lines’:
ndjson-parse.c:72:5: warning: implicit declaration of function ‘gzfread’ [-Wimplicit-function-declaration]
     size_t res = gzfread(buf, 1, MAX_LINE_LENGTH, file);
     ^
gcc -std=gnu11 -I"/opt/R/4.2.3/lib/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -c ndjson-serialize.c -o ndjson-serialize.o
gcc -std=gnu11 -I"/opt/R/4.2.3/lib/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -c utils.c -o utils.o
gcc -std=gnu11 -I"/opt/R/4.2.3/lib/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -c yyjson.c -o yyjson.o
gcc -std=gnu11 -shared -L/opt/R/4.2.3/lib/R/lib -L/usr/local/lib -o yyjsonr.so R-yyjson-parse.o R-yyjson-serialize.o geojson-parse.o geojson-serialize.o init.o ndjson-parse.o ndjson-serialize.o utils.o yyjson.o -lz -L/opt/R/4.2.3/lib/R/lib -lR
installing to /rstudio-home/kamil.foltynski/projects/eppt/renv/staging/1/00LOCK-yyjsonr/00new/yyjsonr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘yyjsonr’
    finding HTML links ... done
    as_scalar                               html  
    opts_read_geojson                       html  
    opts_read_json                          html  
    opts_write_geojson                      html  
    opts_write_json                         html  
    read_geojson_str                        html  
    read_json_conn                          html  
    read_json_file                          html  
    read_json_raw                           html  
    read_json_str                           html  
    read_ndjson_file                        html  
    read_ndjson_raw                         html  
    read_ndjson_str                         html  
    validate_json_file                      html  
    write_geojson_str                       html  
    write_json_file                         html  
    write_json_raw                          html  
    write_json_str                          html  
    write_ndjson_file                       html  
    write_ndjson_raw                        html  
    write_ndjson_str                        html  
    yyjson_read_flag                        html  
    yyjson_version                          html  
    yyjson_write_flag                       html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ‘yyjsonr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/rstudio-home/kamil.foltynski/projects/eppt/renv/staging/1/00LOCK-yyjsonr/00new/yyjsonr/libs/yyjsonr.so':
  /rstudio-home/kamil.foltynski/projects/eppt/renv/staging/1/00LOCK-yyjsonr/00new/yyjsonr/libs/yyjsonr.so: undefined symbol: gzfread
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/rstudio-home/kamil.foltynski/projects/eppt/renv/staging/1/yyjsonr’
install of package 'yyjsonr' failed [error code 1]
Traceback (most recent calls last):
15: install.packages("yyjsonr")
14: eval(call, envir = parent.frame())
13: eval(call, envir = parent.frame())
12: renv::install("yyjsonr")
11: renv_install_impl(records)
10: renv_install_staged(records)
 9: renv_install_default(records)
 8: handler(package, renv_install_package(record))
 7: renv_install_package(record)
 6: withCallingHandlers(renv_install_package_impl(record), error = function(e) writef("FAILED"))
 5: renv_install_package_impl(record)
 4: r_cmd_install(package, path)
 3: r_exec_error(package, output, "install", status)
 2: abort(all)
 1: stop(fallback)

system info:

$ cat /etc/*release
CentOS Linux release 7.9.2009 (Core)
NAME="CentOS Linux"
VERSION="7 (Core)"
ID="centos"
ID_LIKE="rhel fedora"
VERSION_ID="7"
PRETTY_NAME="CentOS Linux 7 (Core)"
ANSI_COLOR="0;31"
CPE_NAME="cpe:/o:centos:centos:7"
HOME_URL="https://www.centos.org/"
BUG_REPORT_URL="https://bugs.centos.org/"

CENTOS_MANTISBT_PROJECT="CentOS-7"
CENTOS_MANTISBT_PROJECT_VERSION="7"
REDHAT_SUPPORT_PRODUCT="centos"
REDHAT_SUPPORT_PRODUCT_VERSION="7"

CentOS Linux release 7.9.2009 (Core)
CentOS Linux release 7.9.2009 (Core)