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Simulator (JS)

• Boolean Networks
  • State characterization
  • BooleNet (Python)
  • BoolNet (R)
  • GINsim (XML)
  • libScopes (SBML)
• State Transition Graph
• Time Series
• jSBGN
• Visualization
  • graphviz
  • bui
  • Use Cases
• SBML
• Annotation
• Kinetics (Copasi)