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lab05(Andrei Daha, Radu Bals): lab05-clustering#32

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AndreiCod wants to merge 3 commits intobozdogalex:mainfrom
AndreiCod:feat/lab05-clustering
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lab05(Andrei Daha, Radu Bals): lab05-clustering#32
AndreiCod wants to merge 3 commits intobozdogalex:mainfrom
AndreiCod:feat/lab05-clustering

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Summary

  • implemented exercises

Lab(s) affected

  • lab05-clustering

Checklist

  • Runs locally (README/Setup followed)
  • Notebook outputs cleared (or pre-commit used)
  • No large data added to repo
  • If MLflow used, runs are reproducible

- Implement hierarchical clustering with average linkage and dendrogram visualization
- Implement K-means clustering (K=2) with PCA visualization
- Implement DBSCAN clustering (eps=1.5, min_samples=5) with PCA visualization
- Save cluster labels to CSV (Diagnosis, KMeans_Cluster, DBSCAN_Cluster)
- Add analysis notes comparing clustering vs phylogenetic trees
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