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Pull requests: bittremieuxlab/denovo_benchmarks

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Pull requests list

Bump pynacl from 1.5.0 to 1.6.2 in /algorithms/pi-PrimeNovo/pi-PrimeNovo/pi-PrimeNovo-PTM dependencies Pull requests that update a dependency file python Pull requests that update python code
#77 opened Jan 6, 2026 by dependabot bot Loading…
1
Bump aiohttp from 3.8.3 to 3.13.3 in /algorithms/pi-PrimeNovo/pi-PrimeNovo/pi-PrimeNovo-PTM dependencies Pull requests that update a dependency file python Pull requests that update python code
#76 opened Jan 6, 2026 by dependabot bot Loading…
1
Bump aiohttp from 3.8.3 to 3.13.3 in /algorithms/pi-PrimeNovo/pi-PrimeNovo dependencies Pull requests that update a dependency file python Pull requests that update python code
#75 opened Jan 6, 2026 by dependabot bot Loading…
1
Bump nbconvert from 5.4.0 to 7.16.6 in /algorithms/smsnet/phospho dependencies Pull requests that update a dependency file python Pull requests that update python code
#74 opened Dec 18, 2025 by dependabot bot Loading…
1
Update Instanovo to v1.2.2
#73 opened Dec 18, 2025 by BioGeek Loading…
3
Bump urllib3 from 1.26.13 to 2.6.0 in /algorithms/pi-PrimeNovo/pi-PrimeNovo dependencies Pull requests that update a dependency file python Pull requests that update python code
#72 opened Dec 5, 2025 by dependabot bot Loading…
1
Bump urllib3 from 1.26.13 to 2.6.0 in /algorithms/pi-PrimeNovo/pi-PrimeNovo/pi-PrimeNovo-PTM dependencies Pull requests that update a dependency file python Pull requests that update python code
#71 opened Dec 5, 2025 by dependabot bot Loading…
1
Bump werkzeug from 2.2.2 to 3.1.4 in /algorithms/pi-PrimeNovo/pi-PrimeNovo/pi-PrimeNovo-PTM dependencies Pull requests that update a dependency file python Pull requests that update python code
#70 opened Dec 2, 2025 by dependabot bot Loading…
1
Bump keras from 2.2.4 to 3.12.0 in /algorithms/smsnet/standard dependencies Pull requests that update a dependency file python Pull requests that update python code
#69 opened Dec 2, 2025 by dependabot bot Loading…
1
Bump fonttools from 4.38.0 to 4.61.0 in /algorithms/pi-PrimeNovo/pi-PrimeNovo dependencies Pull requests that update a dependency file python Pull requests that update python code
#68 opened Dec 1, 2025 by dependabot bot Loading…
1
Bump keras from 2.2.4 to 3.12.0 in /algorithms/smsnet dependencies Pull requests that update a dependency file python Pull requests that update python code
#65 opened Oct 29, 2025 by dependabot bot Loading…
1
update the pre-trained pi-HelixNovo model
#64 opened Oct 22, 2025 by tingpeng17 Loading…
3
Bump jupyterlab from 0.35.0 to 4.4.8 in /algorithms/smsnet/phospho dependencies Pull requests that update a dependency file python Pull requests that update python code
#63 opened Sep 26, 2025 by dependabot bot Loading…
1
Bump pip from 22.3.1 to 25.2 in /algorithms/pi-PrimeNovo/pi-PrimeNovo/pi-PrimeNovo-PTM dependencies Pull requests that update a dependency file python Pull requests that update python code
#62 opened Sep 24, 2025 by dependabot bot Loading…
1
Bump tornado from 5.1.1 to 6.5.1 in /algorithms/smsnet/standard dependencies Pull requests that update a dependency file python Pull requests that update python code
#51 opened May 23, 2025 by dependabot bot Loading…
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