Tomography

Put slices of atom clouds together for a volumetric display.

Files:

• tomography.m

usage:

1. Use listfits to creat a list of your fits images: sideimages = listfits('side_images_directory'); topimages = listfits('top_images_directory');

2. Apply tomography(sideimages,topimages) to get an isosurface plot and stuff

• Old files from may: use for smoothing and stuff

Parameters to play with:

side_a = 170; % width of square crop side_crop = [66,304,side_a,side_a];

top_w = 60; % width of crop (radial) top_l = 400; % length of crop (axial) top_r = 0; % degrees of rotation top_crop = [225,62,top_w,top_l];

surface_level = 0.1;