SCRUM-5829 generate variant summary docs for alleles

[cmpich]

No description provided.

[claude]

Code Review

CI Status: test-compile is failing.

Missing class: AlleleToVariantSummaryConverter (imported from org.alliancegenome.core.variant.converters) does not exist in this repository. The other converters used in this file (AlleleSequenceSummaryConverter, AlleleSearchResultConverter) are defined in agr_java_core/src/main/java/org/alliancegenome/core/variant/converters/, but there is no AlleleToVariantSummaryConverter.java there. This is the likely cause of the compile failure.

If this class is intended to come from an updated external dependency (e.g., a new version of agr_curation_api), make sure that dependency is published and the version is bumped here before merging. If it's meant to live in agr_java_core, it needs to be added in this PR or a prerequisite PR.

Otherwise, the integration pattern is correct:

• Conversion happens before removeTransportFields() — good, since the converter likely needs those transport-only fields.
• Indexing follows the same pattern as searchDocs (no CurationView class passed). This is consistent with how VariantSummaryCurationIndexer indexes VariantSummaryDocument (line 74 of that file — also no view).

No other issues found in the diff.