A deep learning and tree search-based model for de novo peptide sequencing (https://doi.org/10.1101/2025.02.24.640018)
This project includes code from [Casanovo] (https://github.com/Noble-Lab/casanovo) licensed under the Apache License, Version 2.0.
Model(N-terminal and C-terminal Transformers) files in .ckpt format can be downloaded from https://doi.org/10.5281/zenodo.15055488
The synthetic peptide datasets(in .spec format) used for training, validating, and testing PepGo: https://doi.org/10.5281/zenodo.15032178