Updating ci ref#88

Merged

aineniamh merged 3 commits intomainfrom

updating-cI-ref

Jan 26, 2026

Commits on Jan 21, 2026

upper comparison for alignment
aineniamh
committed

Commits on Jan 26, 2026

updating c1 ref, gene coordinates and mask file for resequencing of the ref seq
aineniamh
committed
adding in the old boundaries and old mask file for cladei for record
aineniamh
committed