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ahmedhamidawan
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Aug 7, 2024
Fixes galaxyproject#18633: ``` ValueError: dictionary update sequence element #4 has length 1; 2 is required File "galaxy/tools/__init__.py", line 1969, in handle_single_execution rval = self.execute( File "galaxy/tools/__init__.py", line 2066, in execute return self.tool_action.execute( File "galaxy/tools/actions/model_operations.py", line 89, in execute self._produce_outputs( File "galaxy/tools/actions/model_operations.py", line 120, in _produce_outputs tool.produce_outputs( File "galaxy/tools/__init__.py", line 3816, in produce_outputs new_labels_dict = dict(source_new_label) Exception caught while attempting to execute tool with id '__RELABEL_FROM_FILE__': ```
ahmedhamidawan
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Mar 23, 2026
…aired_or_unpaired Update collection_semantics.yml test references and add workflow framework tests for flat list and flat sample_sheet mapped over paired_or_unpaired. Fix mislabeled test #4 doc string. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
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For the front-end, two new methods using new
resultsArray-of-Objects format which labels theid(tool name) andscore(weights) elements from Whoosh. Previously, theresultswas an Array-of-Strings format from Whoosh (only an unlabeled tool name). (Note: This code assumes prior codebase related to Sorting methods was working properly.)How to test the changes?
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