Skip to content

Conversation

@blaserlab
Copy link

I encountered errors with initializeScenic() and runSCENIC_2_createRegulons() using the mm10 databases. These changes pass the dbIndexCol parameter through to the internal checkAnnots function. This was tested successfully using your R tutorial and the mm10 .feather files provided.

parameterized checkAnnots rnktype

added col parameter to checkAnnots in runSCENIC2

bumped version number
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant