A R package that evaluates DNA copy number data, using both their initial form (copy number as a noisy function of genomic position) and their approximation by a piecewise-constant function (segmentation), for the purpose of identifying genomic regions where the copy number differs from the norm.
Guoli Sun, Pascal Belleau, Astrid Deschênes and Alexander Krasnitz
This package and the underlying CNPrep code are distributed under the GPL-2. You are free to use and redistribute this software.
For more information on GPL-2 License see https://www.gnu.org/licenses/old-licenses/gpl-2.0.txt