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96ab12c
New --unmapped_bam option for providing unmapped BAM files typical for PacBio CCS data.
--unmapped_bam
New --polya_trimmed option to indicate polyA-trimmed reads (thanks @hmutpw for the suggestion #342).
--polya_trimmed
New --process_only_chr option to process a specific list of chromosomes.
--process_only_chr